RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 V9GYY5 206 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SOS1Q07889 1333 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ITIH6Q6UXX5 1313 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 CARMIL1Q5VZK9 1371 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 GREB1LQ9C091 1923 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 A0A0B4J203 849 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 A0A1B0GUA9 196 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 hDV102S1A0JD36 115 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TARSL2A2RTX5 802 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC162PA2VCL2 907 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 OR6C68A6NDL8 312 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 GOLGA6L4A6NEF3 574 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 GOLGA6L9A6NEM1 432 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 FAM157AC9JC47 383 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TIPRLO75663 272 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLC22A3O75751 556 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ACTL6BO94805 426 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 RTN3O95197 1032 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TNFRSF6BO95407 300 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 IL1AP01583 271 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 HSPA1AP0DMV8 641 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 HSPA1BP0DMV9 641 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 EPB41P11171 864 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 LYL1P12980 280 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 EEF2P13639 858 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 GCFC2P16383 781 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ABCB4P21439 1286 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MCM3P25205 808 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 PSMA4P25789 261 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SERPINA4P29622 427 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP5DP30049 168 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TCF7P36402 384 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCT6AP40227 531 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MAGEA9P43362 315 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 HTR3AP46098 478 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCT5P48643 541 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MRPL12P52815 198 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 BLVRAP53004 296 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 AK2P54819 239 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 HDAC4P56524 1084 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 DR1Q01658 176 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 RUNX1T1Q06455 604 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPIDQ08752 370 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 PRKG2Q13237 762 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TNFAIP1Q13829 316 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 IDI1Q13907 227 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 NEDD9Q14511 834 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPARCL1Q14515 664 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 LPIN1Q14693 890 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SYT16Q17RD7 645 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 USH1GQ495M9 461 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 GALNTL6Q49A17 601 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SETMARQ53H47 684 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 C10orf62Q5T681 223 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 INTS11Q5TA45 600 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TTC22Q5TAA0 569 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 NDUFAF5Q5TEU4 345 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 FAM69BQ5VUD6 431 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARMC3Q5W041 872 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 PLA2G4FQ68DD2 849 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 DGAT2L7PQ6IED9 249 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 FIP1L1Q6UN15 594 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATF7IPQ6VMQ6 1270 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 RAPH1Q70E73 1250 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 INTS8Q75QN2 995 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MARK2Q7KZI7 788 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLC26A9Q7LBE3 791 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SNX32Q86XE0 403 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF354CQ86Y25 554 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLC44A2Q8IWA5 706 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 DENND6AQ8IWF6 608 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MB21D2Q8IYB1 491 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC105Q8IYK2 499 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC170Q8IYT3 715 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 LINC00469Q8N7U9 141 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 PTGR2Q8N8N7 351 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 FSIP1Q8NA03 581 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPERTQ8NA61 448 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 KCNH5Q8NCM2 988 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MAPK1IP1LQ8NDC0 245 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MCPH1Q8NEM0 835 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 OR52K2Q8NGK3 314 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 DEPTORQ8TB45 409 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC110Q8TBZ0 833 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 OTUD7AQ8TE49 926 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 PARD3BQ8TEW8 1205 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF606Q8WXB4 792 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP6V1E2Q96A05 226 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SH3KBP1Q96B97 665 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 OTULINQ96BN8 352 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 C3orf49Q96BT1 292 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 EID2BQ96D98 161 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMEM41AQ96HV5 264 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TNIP3Q96KP6 325 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC114Q96M63 670 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZMAT2Q96NC0 199 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 RUFY1Q96T51 708 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 UQCC2Q9BRT2 126 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ISCA1Q9BUE6 129 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 KATNAL1Q9BW62 490 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms