RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	PLK2	Q9NYY3	685 aa		7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	ZNF212	Q9UDV6	495 aa		7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	FBXO4	Q9UKT5	387 aa		7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	MTF2	Q9Y483	593 aa	Predicted RBP	7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	PCDHGA8	Q9Y5G5	932 aa		7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	PCDHGA7	Q9Y5G6	932 aa		7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	PCDHGA6	Q9Y5G7	932 aa		7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	PCDHGA3	Q9Y5H0	932 aa		7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	PCDHGA2	Q9Y5H1	932 aa		7.53	□□□□□ -1.2
GARNL3-222	ENST00000498801	KMT2E	Q8IZD2	1858 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	PRSS38	A1L453	326 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801		H0Y626	953 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801		K7EQS6	105 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	DCLK1	O15075	740 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	KAT7	O95251	611 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	ATP1A1	P05023	1023 aa	Known RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	HNRNPL	P14866	589 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	ERCC2	P18074	760 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	CDKN2B	P42772	138 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	RECQL	P46063	649 aa	Predicted RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	MRPS21	P82921	87 aa	Known RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	SRSF2	Q01130	221 aa	Known RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	ADCY2	Q08462	1091 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	ZNF177	Q13360	481 aa	Predicted RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	CDH18	Q13634	790 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	UBXN2B	Q14CS0	331 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	PON2	Q15165	354 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	TAZ	Q16635	292 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	ANKRD20A8P	Q5CZ79	823 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	TFDP3	Q5H9I0	405 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	PITRM1	Q5JRX3	1037 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	DCAF12L1	Q5VU92	463 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	GRAMD4	Q6IC98	578 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	CXorf57	Q6NSI4	855 aa	Known RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	MFSD7	Q6UXD7	560 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	UNQ6494/PRO21346	Q6UXR6	183 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	SPOCD1	Q6ZMY3	1216 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	ANKS1B	Q7Z6G8	1248 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	B3GNT8	Q7Z7M8	397 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	NLRP14	Q86W24	1093 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	MFN1	Q8IWA4	741 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	CCDC117	Q8IWD4	279 aa	Predicted RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	MAML2	Q8IZL2	1156 aa	Predicted RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	CARNMT1	Q8N4J0	409 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	RTL3	Q8N8U3	475 aa	Known RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	FIBIN	Q8TAL6	211 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	WFIKKN2	Q8TEU8	576 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	FAF2	Q96CS3	445 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	RNF157	Q96PX1	679 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	WDR24	Q96S15	920 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	QRSL1	Q9H0R6	528 aa	Known RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	DNAJC17	Q9NVM6	304 aa	Known RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	TMEM248	Q9NWD8	314 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	DNAJC28	Q9NX36	388 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	DEC1	Q9P2X7	70 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	CLEC4E	Q9ULY5	219 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	TBC1D30	Q9Y2I9	924 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	MRFAP1	Q9Y605	127 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	KIAA1549L	Q6ZVL6	1849 aa		7.52	□□□□□ -1.21
GARNL3-222	ENST00000498801	hCG_1818297	A0A087WSY0	165 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	TEX51	A0A1B0GUA7	166 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	CTAGE9	A4FU28	777 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	TIMM44	O43615	452 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	ATG13	O75143	517 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	EGF	P01133	1207 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	APOD	P05090	189 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	RHOC	P08134	193 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	KRT10	P13645	584 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	CD72	P21854	359 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	HLA-F	P30511	346 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	OR1E1	P30953	314 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	PTPN7	P35236	360 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	CETN2	P41208	172 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	CCR3	P51677	355 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	LMAN2	Q12907	356 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	MTAP	Q13126	283 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	SLC12A1	Q13621	1099 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	DMC1	Q14565	340 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	ODF1	Q14990	250 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	UGT8	Q16880	541 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	FSCB	Q5H9T9	825 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	TOR2A	Q5JU69	321 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	KAZN	Q674X7	775 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	NCBP2-AS2	Q69YL0	99 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	SLC9A4	Q6AI14	798 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	AADACL2	Q6P093	401 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	TMCO3	Q6UWJ1	677 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	ZNF783	Q6ZMS7	281 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801		Q6ZS52	159 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	SYT13	Q7L8C5	426 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	TRMT11	Q7Z4G4	463 aa	Known RBP	7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	SETD3	Q86TU7	594 aa	Predicted RBP	7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	RFX6	Q8HWS3	928 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	C1orf210	Q8IVY1	113 aa		7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	WDR75	Q8IWA0	830 aa	Known RBP	7.51	□□□□□ -1.21
GARNL3-222	ENST00000498801	UMODL1-AS1	Q8N2C9	162 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms