RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 TAF1AQ15573 450 aaPredicted RBP16.67■□□□□ 0.26
PRKCB-210ENST00000498739 KCTD16Q68DU8 428 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 PSAPL1Q6NUJ1 521 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 DOK6Q6PKX4 331 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 SYT10Q6XYQ8 523 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 PPP1R21Q6ZMI0 780 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 KANSL1Q7Z3B3 1105 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 DGLUCYQ7Z3D6 616 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 TRIM74Q86UV6 250 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 CREG2Q8IUH2 290 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 SLC25A45Q8N413 288 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 TRAM1L1Q8N609 369 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 EID2Q8N6I1 236 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 DNAAF3Q8N9W5 541 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 ZNF548Q8NEK5 533 aaPredicted RBP16.67■□□□□ 0.26
PRKCB-210ENST00000498739 OR52K1Q8NGK4 314 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 BRSK1Q8TDC3 778 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 LMX1AQ8TE12 382 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 OR1E3Q8WZA6 343 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 HIC2Q96JB3 615 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 PLEKHG4BQ96PX9 1271 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 ZSCAN5AQ9BUG6 496 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 MRPL40Q9NQ50 206 aaKnown RBP16.67■□□□□ 0.26
PRKCB-210ENST00000498739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRKCB-210ENST00000498739 IL17CQ9P0M4 197 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 NFKBIL1Q9UBC1 381 aaPredicted RBP16.67■□□□□ 0.26
PRKCB-210ENST00000498739 SPASTQ9UBP0 616 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 GIPC1O14908 333 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 FFAR2O15552 330 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 AQP9O43315 295 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 SUN1O94901 812 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 CRTAMO95727 393 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 CEACAM1P13688 526 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 CTSEP14091 401 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 TPH1P17752 444 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 LPOP22079 712 aaPredicted RBP16.66■□□□□ 0.26
PRKCB-210ENST00000498739 SPAM1P38567 509 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 PAFAH1B1P43034 410 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 FNTAP49354 379 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 TERF1P54274 439 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 CDH17Q12864 832 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 MSLNQ13421 630 aaPredicted RBP16.66■□□□□ 0.26
PRKCB-210ENST00000498739 C1orf61Q13536 156 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 PTPRCAPQ14761 206 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 TCEA2Q15560 299 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 PRRT3Q5FWE3 981 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 PPM1JQ5JR12 505 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 GRK7Q8WTQ7 553 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 LRRC61Q9BV99 259 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 FRMD8Q9BZ67 464 aaPredicted RBP16.66■□□□□ 0.26
PRKCB-210ENST00000498739 SUDS3Q9H7L9 328 aaPredicted RBP16.66■□□□□ 0.26
PRKCB-210ENST00000498739 CYP4F12Q9HCS2 524 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 TMEM98Q9Y2Y6 226 aa16.66■□□□□ 0.26
PRKCB-210ENST00000498739 CFAP54Q96N23 3096 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 PRSS38A1L453 326 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 NEMP2A6NFY4 417 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 TNFRSF10CO14798 259 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 CBFA2T3O75081 653 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 PPFIA2O75334 1257 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 ASMTLO95671 621 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 GAS8O95995 478 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 CEACAM5P06731 702 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 GRIA1P42261 906 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 POLD2P49005 469 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 PDE1BQ01064 536 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 GPS1Q13098 491 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 SEPT6Q14141 434 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 POU6F1Q14863 301 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 HS1BP3Q53T59 392 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 ZDHHC20Q5W0Z9 365 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 OR4K2Q8NGD2 314 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 BAHD1Q8TBE0 780 aaPredicted RBP16.65■□□□□ 0.26
PRKCB-210ENST00000498739 COX14Q96I36 57 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
PRKCB-210ENST00000498739 DDX47Q9H0S4 455 aaKnown RBP16.65■□□□□ 0.26
PRKCB-210ENST00000498739 CARS2Q9HA77 564 aaKnown RBP16.65■□□□□ 0.26
PRKCB-210ENST00000498739 EIF2B3Q9NR50 452 aaKnown RBP16.65■□□□□ 0.26
PRKCB-210ENST00000498739 CNOT6Q9ULM6 557 aaKnown RBP16.65■□□□□ 0.26
PRKCB-210ENST00000498739 KCTD3Q9Y597 815 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 DGKBQ9Y6T7 804 aa16.65■□□□□ 0.26
PRKCB-210ENST00000498739 DMXL1Q9Y485 3027 aa16.64■□□□□ 0.26
PRKCB-210ENST00000498739 GLYATL1P3A0A0U1RQE8 302 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 ECEL1O95672 775 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 ALPPL2P10696 532 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 GNPDA1P46926 289 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 TMPRSS15P98073 1019 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 TRIP6Q15654 476 aaKnown RBP16.64■□□□□ 0.25
PRKCB-210ENST00000498739 PDPK2PQ6A1A2 396 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 FAM151BQ6UXP7 276 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 MARK2Q7KZI7 788 aaKnown RBP16.64■□□□□ 0.25
PRKCB-210ENST00000498739 OR13C4Q8NGS5 318 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 PTCD2Q8WV60 388 aaKnown RBP16.64■□□□□ 0.25
PRKCB-210ENST00000498739 TBATAQ96M53 351 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 CDC6Q99741 560 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 CLPBQ9H078 707 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 IL26Q9NPH9 171 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.64■□□□□ 0.25
PRKCB-210ENST00000498739 RNF14Q9UBS8 474 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 FTSJ1Q9UET6 329 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 SUFUQ9UMX1 484 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms