RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 DPP6P42658 865 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 NPY2RP49146 381 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MTNR1BP49286 362 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SERPINB8P50452 374 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CDK9P50750 372 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 ATP4BP51164 291 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 NR1H2P55055 460 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SNRPNP63162 240 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 RBP5P82980 135 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CDKL1Q00532 357 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MS4A2Q01362 244 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 NRG1Q02297 640 aaPredicted RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 GBE1Q04446 702 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CEACAM7Q14002 265 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 VGLL4Q14135 290 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 KRT81Q14533 505 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 FSCN1Q16658 493 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 FAM110CQ1W6H9 321 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MMEL1Q495T6 779 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SPATS1Q496A3 300 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 NADK2Q4G0N4 442 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 XKR4Q5GH76 650 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CELF3Q5SZQ8 465 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 ARTNQ5T4W7 220 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PMF1Q6P1K2 205 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 LILRA6Q6PI73 481 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 C17orf99Q6UX52 265 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 Q6ZNX1 250 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 ZCCHC23Q6ZST2 131 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 OTOP3Q7RTS5 596 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 ERI1Q8IV48 349 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 CTAGE3PQ8IX95 158 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 DSELQ8IZU8 1212 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 NUP93Q8N1F7 819 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PLD6Q8N2A8 252 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 PAF1Q8N7H5 531 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 ANKFN1Q8N957 763 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SHCBP1Q8NEM2 672 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 HM13Q8TCT9 377 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 STYXQ8WUJ0 223 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 GAB3Q8WWW8 586 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SOCS4Q8WXH5 440 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CDKL2Q92772 493 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 GFM2Q969S9 779 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 TSGA13Q96PP4 275 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 LENG8Q96PV6 779 aaPredicted RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 SERPINI1Q99574 410 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 GATA5Q9BWX5 397 aaPredicted RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 CALN1Q9BXU9 219 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SEZ6LQ9BYH1 1024 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 BRD8Q9H0E9 1235 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 Q9H521 79 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PLEKHA5Q9HAU0 1116 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SNX15Q9NRS6 342 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PRMT7Q9NVM4 692 aaPredicted RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 LMCD1Q9NZU5 365 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 BCAP29Q9UHQ4 241 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MID2Q9UJV3 735 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 TSPAN16Q9UKR8 245 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MKL2Q9ULH7 1088 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 ZNF510Q9Y2H8 683 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 B3GALT1Q9Y5Z6 326 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PSAT1Q9Y617 370 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SQORQ9Y6N5 450 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 DNAH12Q6ZR08 3092 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 COL1A2P08123 1366 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PDCD11Q14690 1871 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 ERI2A8K979 691 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 E9PBE3 544 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 FAM227AF5H4B4 570 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MAN2B1O00754 1011 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SCDO00767 359 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CNMDO75829 334 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 OR6B1O95007 311 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 C22orf31O95567 290 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 TOP3BO95985 862 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 POU2F2P09086 479 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CYP2C9P11712 490 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CD1EP15812 388 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 NOS3P29474 1203 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SLC5A2P31639 672 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SPRP35270 261 aaPredicted RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 GARSP41250 739 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 NDST1P52848 882 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 AIF1P55008 147 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SNX16P57768 344 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 TFAMQ00059 246 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 SRSF2Q01130 221 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 ZNF33AQ06730 810 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 GALNT1Q10472 559 aaPredicted RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 SCAPQ12770 1279 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 LRP8Q14114 963 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SLC14A2Q15849 920 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MGAT5BQ3V5L5 792 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 LRRC23Q53EV4 343 aaPredicted RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 MDH1BQ5I0G3 518 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 ZNF484Q5JVG2 852 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 OR6B2Q6IFH4 312 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 KLC3Q6P597 504 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 OGFOD3Q6PK18 319 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 242.1 ms