RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 TBX20Q9UMR3 447 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.95□□□□□ -1.62
SSR3-209ENST00000498205 USP16Q9Y5T5 823 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 PLCH1Q4KWH8 1693 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 MYH3P11055 1940 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 AKAP11Q9UKA4 1901 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 NEDD4P46934 1319 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 SHANK3Q9BYB0 1731 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 ANKRD36CQ5JPF3 1778 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 ZNF831Q5JPB2 1677 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 A0A1B0GVT2 93 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 CLEC18AA5D8T8 446 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 ERVV-1B6SEH8 477 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 E7EWF7 191 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 NCAM2O15394 837 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 HOXC11O43248 304 aaPredicted RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 AP5Z1O43299 807 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 ATP8B1O43520 1251 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 CTDNEP1O95476 244 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 PCP11498 1178 aaKnown RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 U2AF2P26368 475 aaKnown RBP eCLIP4.94□□□□□ -1.622e-11■■□□□ 12.7
SSR3-209ENST00000498205 CCKBRP32239 447 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 TTKP33981 857 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 CCR5P51681 352 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 TPM4P67936 248 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 ECT2LQ008S8 904 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 GABPB1Q06547 395 aaPredicted RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 CAMK1Q14012 370 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 LPIN1Q14693 890 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 SLC39A14Q15043 492 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 SHBQ15464 509 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 NFIL3Q16649 462 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 CCDC158Q5M9N0 1113 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 UBAP2Q5T6F2 1119 aaKnown RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 CPLX2Q6PUV4 134 aaKnown RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 STOX1Q6ZVD7 989 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 MEPCEQ7L2J0 689 aaKnown RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 TMTC1Q8IUR5 882 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 LRRC8AQ8IWT6 810 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 MB21D2Q8IYB1 491 aaPredicted RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 NECAB1Q8N987 351 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 TRIML1Q8N9V2 468 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 CLEC18CQ8NCF0 446 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 NCOA7Q8NI08 942 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 WASF1Q92558 559 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 EYA3Q99504 573 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 CLSTN3Q9BQT9 956 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 INTS2Q9H0H0 1204 aaKnown RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 WWOXQ9NZC7 414 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 IL1RAPL1Q9NZN1 696 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 CGNQ9P2M7 1197 aaKnown RBP4.94□□□□□ -1.62
SSR3-209ENST00000498205 CLIP2Q9UDT6 1046 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 GJD2Q9UKL4 321 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 DOCK2Q92608 1830 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 ABCA3Q99758 1704 aa4.94□□□□□ -1.62
SSR3-209ENST00000498205 A0A1B0GUL7 405 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 A0A1B0GVM2 712 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 TYW5A2RUC4 315 aaKnown RBP4.93□□□□□ -1.62
SSR3-209ENST00000498205 KDM4EB2RXH2 506 aaPredicted RBP4.93□□□□□ -1.62
SSR3-209ENST00000498205 ACOT8O14734 319 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 TPM1P09493 284 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 UQCRFS1P1P0C7P4 283 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 CBSLP0DN79 551 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 FDPSP14324 419 aaKnown RBP4.93□□□□□ -1.62
SSR3-209ENST00000498205 CD58P19256 250 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 CBSP35520 551 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 MAPK9P45984 424 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 SEC61A1P61619 476 aaKnown RBP4.93□□□□□ -1.62
SSR3-209ENST00000498205 CYP4A11Q02928 519 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 HNF4GQ14541 408 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 FBXO43Q4G163 708 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 ZNF766Q5HY98 468 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 TAF3Q5VWG9 929 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 RRM2BQ7LG56 351 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 CCDC186Q7Z3E2 898 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 TBC1D26Q86UD7 250 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 LUZP1Q86V48 1076 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 DHX40Q8IX18 779 aaKnown RBP4.93□□□□□ -1.62
SSR3-209ENST00000498205 TMTC2Q8N394 836 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 MIGA1Q8NAN2 632 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 KIF18AQ8NI77 898 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 ERO1AQ96HE7 468 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 CCDC34Q96HJ3 373 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 MED30Q96HR3 178 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 USP28Q96RU2 1077 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 FUZQ9BT04 418 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 PHF7Q9BWX1 381 aaPredicted RBP4.93□□□□□ -1.62
SSR3-209ENST00000498205 RRN3Q9NYV6 651 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 OGFRQ9NZT2 677 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 NDRG3Q9UGV2 375 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 HOOK1Q9UJC3 728 aaKnown RBP4.93□□□□□ -1.62
SSR3-209ENST00000498205 NWD2Q9ULI1 1742 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 PYCARDQ9ULZ3 195 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 PHLPP2Q6ZVD8 1323 aa4.93□□□□□ -1.62
SSR3-209ENST00000498205 RREB1Q92766 1687 aa4.92□□□□□ -1.62
SSR3-209ENST00000498205 C4AP0C0L4 1744 aa4.92□□□□□ -1.62
SSR3-209ENST00000498205 C4BP0C0L5 1744 aa4.92□□□□□ -1.62
SSR3-209ENST00000498205 DISP2A7MBM2 1401 aa4.92□□□□□ -1.62
SSR3-209ENST00000498205 RIC1Q4ADV7 1423 aa4.92□□□□□ -1.62
SSR3-209ENST00000498205 STRCP1A6NGW2 1772 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms