RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LRRC9Q6ZRR7 1453 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 CCNB3Q8WWL7 1395 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-224ENST00000497488 MYADML2A6NDP7 307 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 CGB1A6NKQ9 187 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 YDJCA8MPS7 323 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 CAPN14A8MX76 684 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 MCIDASD6RGH6 385 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 SGK1O00141 431 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 MATN2O00339 956 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 PRAMEF2O60811 474 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 AKR7A3O95154 331 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 ZFPL1O95159 310 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 GPANK1O95872 356 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 SLC16A8O95907 504 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 MT-CYBP00156 380 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-224ENST00000497488 CYC1P08574 325 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 LINGO3P0C6S8 592 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 GZMAP12544 262 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 PFKFB1P16118 471 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 VCLP18206 1134 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 DNASE1P24855 282 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 CHRNA3P32297 505 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 LIPAP38571 399 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 ASMTP46597 345 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 GBX2P52951 348 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-224ENST00000497488 SH3BGRP55822 239 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-224ENST00000497488 CCNA1P78396 465 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 SRSF3P84103 164 aaKnown RBP6.1□□□□□ -1.43
BRCA1-224ENST00000497488 ADORA2A-AS1P86434 159 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 CETN1Q12798 172 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 VWC2Q2TAL6 325 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 CDONQ4KMG0 1287 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 FOXR2Q6PJQ5 311 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 TRAPPC11Q7Z392 1133 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 TLK2Q86UE8 772 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 TSPAN33Q86UF1 283 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 SLC51AQ86UW1 340 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 UNC5CLQ8IV45 518 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 KLHL36Q8N4N3 616 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 GIMAP1Q8WWP7 306 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 TMEM125Q96AQ2 219 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 TUBGCP3Q96CW5 907 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 R3HDM4Q96D70 268 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 SAMD8Q96LT4 415 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 LRRC3BQ96PB8 259 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 DPYSL5Q9BPU6 564 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 WDR83Q9BRX9 315 aaKnown RBP6.1□□□□□ -1.43
BRCA1-224ENST00000497488 ERP44Q9BS26 406 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 KATNB1Q9BVA0 655 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 ACTRT3Q9BYD9 372 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 NCOR1P1Q9H4R4 102 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 INTS13Q9NVM9 706 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 ARL15Q9NXU5 204 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.1□□□□□ -1.43
BRCA1-224ENST00000497488 GMEB2Q9UKD1 530 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 SNX7Q9UNH6 387 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 ABCA6Q8N139 1617 aa6.1□□□□□ -1.43
BRCA1-224ENST00000497488 A0A0A6YYC8 382 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 A0A1W2PPM1 405 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 I3L1I5 382 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 PES1O00541 588 aaKnown RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 TMPRSS11DO60235 418 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 MED24O75448 989 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 SCAF4O95104 1147 aaKnown RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 ZWINTO95229 277 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 C1RP00736 705 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 MT-ATP6P00846 226 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 TGFB1P01137 390 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 FGBP02675 491 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 PRLRP16471 622 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 SFNP31947 248 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 STAT6P42226 847 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 PITPNBP48739 271 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 CDR1P51861 262 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 ARSFP54793 590 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 UCP2P55851 309 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 CLDN2P57739 230 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 TAS2R40P59535 323 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 BEX3Q00994 111 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 OCA2Q04671 838 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 RUNX1T1Q06455 604 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 DPYSQ14117 519 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 CYP1B1Q16678 543 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 GEN1Q17RS7 908 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 TEX35Q5T0J7 233 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 MAVSQ7Z434 540 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 MDGA2Q7Z553 956 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 LDB1Q86U70 411 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 GPR135Q8IZ08 494 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 EXD3Q8N9H8 876 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 SLC4A11Q8NBS3 891 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 ROBO4Q8WZ75 1007 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 AKAP1Q92667 903 aaKnown RBP eCLIP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 ZNF75CPQ92670 426 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 SPSB1Q96BD6 273 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 SPACA9Q96E40 222 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 GPR78Q96P69 363 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 PRR25Q96S07 402 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 SCNM1Q9BWG6 230 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms