RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 TMEM151AQ8N4L1 468 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 LINC01356Q8N9X3 169 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SMRP1Q8NCR6 262 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 NSUN7Q8NE18 718 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 BHLHE22Q8NFJ8 381 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 OR10S1Q8NGN2 331 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 GRK7Q8WTQ7 553 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 HDAC7Q8WUI4 952 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CELF1Q92879 486 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SNAPC3Q92966 411 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MR1Q95460 341 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MMABQ96EY8 250 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 PDLIM5Q96HC4 596 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TMEM176AQ96HP8 235 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 FER1L6-AS2Q96M78 137 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 KLHL15Q96M94 604 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 NAP1L5Q96NT1 182 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ABHD1Q96SE0 405 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 AGAP2Q99490 1192 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 EIF3CQ99613 913 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 H2AFJQ9BTM1 129 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TUBB2BQ9BVA1 445 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ALG8Q9BVK2 526 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ELOVL1Q9BW60 279 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 FUT8Q9BYC5 575 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 GPR88Q9GZN0 384 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TMEM39BQ9GZU3 492 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CLPBQ9H078 707 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SIL1Q9H173 461 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 OSGEPL1Q9H4B0 414 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TASP1Q9H6P5 420 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 POLR1BQ9H9Y6 1135 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SEMA4GQ9NTN9 838 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ABHD10Q9NUJ1 306 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TBCCD1Q9NVR7 557 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TMEM248Q9NWD8 314 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TAB2Q9NYJ8 693 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SERTAD3Q9UJW9 196 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 GMEB2Q9UKD1 530 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 REXO2Q9Y3B8 237 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TRPV2Q9Y5S1 764 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 USP16Q9Y5T5 823 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 IRAK3Q9Y616 596 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 FPGT-TNNI3KV9GXZ4 949 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 UBR2Q8IWV8 1755 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 APCP25054 2843 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TGP01266 2768 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 KIAA1217Q5T5P2 1943 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 CSPG4Q6UVK1 2322 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 MAST3O60307 1309 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 MROH7Q68CQ1 1323 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 TEX13CA0A0J9YWL9 993 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 TRBC2A0A5B9 178 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 LINC01553A4QN01 128 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 GOLGA6L6A8MZA4 724 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 B8ZZF3 427 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 USP17L23D6RBM5 183 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 F5H697 171 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 EBAG9O00559 213 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZNF185O15231 689 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 RNMTO43148 476 aaKnown RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 HBP1O60381 514 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 FOXD2O60548 495 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 DDAH2O95865 285 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 OLFM2O95897 454 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 SERPINC1P01008 464 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 HLA-DQA2P01906 255 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 RB1P06400 928 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 GALTP07902 379 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 IL6RP08887 468 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 DLDP09622 509 aaKnown RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 LYL1P12980 280 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 C6P13671 934 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZFXP17010 805 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 ATF7P17544 494 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 LAG3P18627 525 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 GATA3P23771 443 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 SSTR4P31391 388 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 LIPAP38571 399 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 CASP3P42574 277 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 CAPZA2P47755 286 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 CENPAP49450 140 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 LIG4P49917 911 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 CCR3P51677 355 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 MRPL12P52815 198 aaKnown RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 POLGP54098 1239 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 CCL23P55773 120 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 PPP2CBP62714 309 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 PPP2CAP67775 309 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 TUBB4BP68371 445 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 HSD11B2P80365 405 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 B4GALNT1Q00973 533 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 CEBPZQ03701 1054 aaKnown RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 YWHAHQ04917 246 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 DEUP1Q05D60 604 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 GOLGA8DPQ0D2H9 430 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 NEXNQ0ZGT2 675 aa2.52□□□□□ -2.01
CKS1BP2-201ENST00000497342 FOXL1Q12952 345 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms