RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 C1orf232A0A0U1RR37 186 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 LRRD1A4D1F6 860 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 K7ENP7 123 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 KCNK1O00180 336 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 AKR1B10O60218 316 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 PRAMEF10O60809 474 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 CLDN7O95471 211 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 CPNE6O95741 557 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 PRLP01236 227 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 JCHAINP01591 159 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 PYGLP06737 847 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 MAN1A1P33908 653 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 ETV5P41161 510 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 SLC10A2Q12908 348 aaPredicted RBP12.88□□□□□ -0.35
FN1-226ENST00000496542 PEX6Q13608 980 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 TRIM14Q14142 442 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 C16orf72Q14CZ0 275 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 TGIF1Q15583 401 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 INO80CQ6PI98 192 aaPredicted RBP12.88□□□□□ -0.35
FN1-226ENST00000496542 USP53Q70EK8 1073 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 GALNT13Q8IUC8 556 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 NAGSQ8N159 534 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 ZNF843Q8N446 348 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 SNRNP27Q8WVK2 155 aaKnown RBP12.88□□□□□ -0.35
FN1-226ENST00000496542 RAPGEF5Q92565 580 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 TMEM159Q96B96 161 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 SCARF2Q96GP6 870 aaPredicted RBP12.88□□□□□ -0.35
FN1-226ENST00000496542 CMKLR1Q99788 373 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 NUDT22Q9BRQ3 303 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 ZNHIT6Q9NWK9 470 aaKnown RBP12.88□□□□□ -0.35
FN1-226ENST00000496542 DTLQ9NZJ0 730 aa12.88□□□□□ -0.35
FN1-226ENST00000496542 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
FN1-226ENST00000496542 NVLO15381 856 aaKnown RBP12.87□□□□□ -0.35
FN1-226ENST00000496542 ZW10O43264 779 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 CBFA2T2O43439 604 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 ASMTLO95671 621 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 TMEM253P0C7T8 217 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 KDELR1P24390 212 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 CD86P42081 329 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 PPM1FP49593 454 aaPredicted RBP12.87□□□□□ -0.35
FN1-226ENST00000496542 RPL26P61254 145 aaKnown RBP12.87□□□□□ -0.35
FN1-226ENST00000496542 LY6DQ14210 128 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 NR1D2Q14995 579 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 ASTE1Q2TB18 679 aaPredicted RBP12.87□□□□□ -0.35
FN1-226ENST00000496542 PYCR3Q53H96 274 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 NRSN1Q8IZ57 195 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 EXD1Q8NHP7 514 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.87□□□□□ -0.35
FN1-226ENST00000496542 TTC9Q92623 222 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 USP7Q93009 1102 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 HDAC11Q96DB2 347 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 CCDC74BQ96LY2 380 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 RNF157Q96PX1 679 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 DNAJC7Q99615 494 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 FOXJ2Q9P0K8 574 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 AKAP7Q9P0M2 348 aaPredicted RBP12.87□□□□□ -0.35
FN1-226ENST00000496542 ACSL6Q9UKU0 697 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 RPL26L1Q9UNX3 145 aaKnown RBP12.87□□□□□ -0.35
FN1-226ENST00000496542 HEY1Q9Y5J3 304 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 SDK2Q58EX2 2172 aa12.87□□□□□ -0.35
FN1-226ENST00000496542 TRBV23OR9-2A0A075B6M9 112 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 SSU72P8A0A1W2PR75 194 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 PPM1DO15297 605 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 KRT1P04264 644 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 ATP1A1P05023 1023 aaKnown RBP12.86□□□□□ -0.35
FN1-226ENST00000496542 MMP2P08253 660 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 TPM1P09493 284 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 LIPCP11150 499 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 PTMSP20962 102 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 CD1CP29017 333 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 GPR3P46089 330 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 PPIDQ08752 370 aaKnown RBP12.86□□□□□ -0.35
FN1-226ENST00000496542 AP1B1Q10567 949 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 ZBTB17Q13105 803 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 SRSF6Q13247 344 aaKnown RBP12.86□□□□□ -0.35
FN1-226ENST00000496542 QPCTQ16769 361 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 FAM182AQ5T1J6 154 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 NKAIN2Q5VXU1 208 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 VASH2Q86V25 355 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 NLRP8Q86W28 1048 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 ZFAND4Q86XD8 727 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 ZNF761Q86XN6 746 aaPredicted RBP12.86□□□□□ -0.35
FN1-226ENST00000496542 PLD5Q8N7P1 536 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 RCBTB1Q8NDN9 531 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 WBP1Q96G27 269 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 COX14Q96I36 57 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 CEP41Q9BYV8 373 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 SEMA4CQ9C0C4 833 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 SPTLC3Q9NUV7 552 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 KCNK4Q9NYG8 393 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 SEPT10Q9P0V9 454 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 PRKAB1Q9Y478 270 aa12.86□□□□□ -0.35
FN1-226ENST00000496542 OAS3Q9Y6K5 1087 aaKnown RBP12.86□□□□□ -0.35
FN1-226ENST00000496542 IGHV1OR21-1A0A087WYE8 117 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 IGHV5-10-1A0A0J9YXX1 117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms