RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 TEX51A0A1B0GUA7 166 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 SPOPO43791 374 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 ITGA2BP08514 1039 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 COMTP21964 271 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 ALDH4A1P30038 563 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 ACTR1BP42025 376 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 NR2C2P49116 596 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 SPINT3P49223 89 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 MAZP56270 477 aaKnown RBP12.67□□□□□ -0.38
PTPRF-214ENST00000496043 TMPRSS3P57727 454 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 OR1D5P58170 312 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 ACTR1AP61163 376 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 ZFP36L1Q07352 338 aaKnown RBP12.67□□□□□ -0.38
PTPRF-214ENST00000496043 ZBTB17Q13105 803 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 COL9A2Q14055 689 aaPredicted RBP12.67□□□□□ -0.38
PTPRF-214ENST00000496043 TFDP2Q14188 446 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 PYCR3Q53H96 274 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 CCDC70Q6NSX1 233 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 MARK2Q7KZI7 788 aaKnown RBP12.67□□□□□ -0.38
PTPRF-214ENST00000496043 CLEC14AQ86T13 490 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 LSM14AQ8ND56 463 aaKnown RBP12.67□□□□□ -0.38
PTPRF-214ENST00000496043 PTCD2Q8WV60 388 aaKnown RBP12.67□□□□□ -0.38
PTPRF-214ENST00000496043 COX14Q96I36 57 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 AGAP3Q96P47 875 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 BBC3Q96PG8 261 aaPredicted RBP12.67□□□□□ -0.38
PTPRF-214ENST00000496043 OR2M4Q96R27 311 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 CDH19Q9H159 772 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 SLC25A51Q9H1U9 297 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.67□□□□□ -0.38
PTPRF-214ENST00000496043 SEPT10Q9P0V9 454 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 ZNHIT2Q9UHR6 403 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 PLEKHM1Q9Y4G2 1056 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 ALG6Q9Y672 507 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 SHROOM3Q8TF72 1996 aa12.67□□□□□ -0.38
PTPRF-214ENST00000496043 LAMA5O15230 3695 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 PMS2P1A4D2B8 440 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 TK2O00142 265 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 INPP4BO15327 924 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 JMJD7P0C870 316 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 GPR3P46089 330 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 CDK18Q07002 472 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 LRP8Q14114 963 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 CLPPQ16740 277 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-214ENST00000496043 AMZ1Q400G9 498 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 TEX44Q53QW1 395 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 SARM1Q6SZW1 724 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 MFSD7Q6UXD7 560 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 USP53Q70EK8 1073 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 KDELC2Q7Z4H8 507 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 TRIM74Q86UV6 250 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 JAMLQ86YT9 394 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 GALNT13Q8IUC8 556 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 NAGSQ8N159 534 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 IMP4Q96G21 291 aaKnown RBP12.66□□□□□ -0.38
PTPRF-214ENST00000496043 WDR24Q96S15 920 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 CMKLR1Q99788 373 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 ZFYVE1Q9HBF4 777 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 MAGEE1Q9HCI5 957 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 RAD18Q9NS91 495 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 AKAP7Q9P0M2 348 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-214ENST00000496043 VPS18Q9P253 973 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 CNOT6Q9ULM6 557 aaKnown RBP12.66□□□□□ -0.38
PTPRF-214ENST00000496043 HYOU1Q9Y4L1 999 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 PCDHGA7Q9Y5G6 932 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 ST14Q9Y5Y6 855 aa12.66□□□□□ -0.38
PTPRF-214ENST00000496043 ATXN7O15265 892 aaPredicted RBP12.65□□□□□ -0.38
PTPRF-214ENST00000496043 PPM1DO15297 605 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 ZRANB2O95218 330 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPRF-214ENST00000496043 CPNE6O95741 557 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 SLC5A2P31639 672 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 HADHBP55084 474 aaKnown RBP12.65□□□□□ -0.38
PTPRF-214ENST00000496043 DYNLT1P63172 113 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 SQSTM1Q13501 440 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 NR1D2Q14995 579 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 PHF19Q5T6S3 580 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 ARHGAP40Q5TG30 622 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 CCDC170Q8IYT3 715 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 RCOR2Q8IZ40 523 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 OLFM3Q96PB7 478 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 SRPK1Q96SB4 655 aaKnown RBP12.65□□□□□ -0.38
PTPRF-214ENST00000496043 CEP41Q9BYV8 373 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 RMI1Q9H9A7 625 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 GLOD4Q9HC38 313 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 CPNE5Q9HCH3 593 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 PISDQ9UG56 409 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 LOXL2Q9Y4K0 774 aa12.65□□□□□ -0.38
PTPRF-214ENST00000496043 TRBV23OR9-2A0A075B6M9 112 aa12.64□□□□□ -0.39
PTPRF-214ENST00000496043 NVLO15381 856 aaKnown RBP12.64□□□□□ -0.39
PTPRF-214ENST00000496043 PSTPIP1O43586 416 aa12.64□□□□□ -0.39
PTPRF-214ENST00000496043 CST8O60676 142 aa12.64□□□□□ -0.39
PTPRF-214ENST00000496043 DNAJC6O75061 913 aa12.64□□□□□ -0.39
PTPRF-214ENST00000496043 ATP1A1P05023 1023 aaKnown RBP12.64□□□□□ -0.39
PTPRF-214ENST00000496043 HGFP14210 728 aa12.64□□□□□ -0.39
PTPRF-214ENST00000496043 CD1CP29017 333 aa12.64□□□□□ -0.39
PTPRF-214ENST00000496043 CDKN2BP42772 138 aa12.64□□□□□ -0.39
PTPRF-214ENST00000496043 RHDQ02161 417 aa12.64□□□□□ -0.39
PTPRF-214ENST00000496043 VAC14Q08AM6 782 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms