RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-205	ENST00000495653	SIRPG	Q9P1W8	387 aa		13.91	□□□□□ -0.18
PTPN23-205	ENST00000495653	CNOT6	Q9ULM6	557 aa	Known RBP	13.91	□□□□□ -0.18
PTPN23-205	ENST00000495653	SUFU	Q9UMX1	484 aa		13.91	□□□□□ -0.18
PTPN23-205	ENST00000495653	GOLGA4	Q13439	2230 aa	Known RBP	13.91	□□□□□ -0.18
PTPN23-205	ENST00000495653	CEP295	Q9C0D2	2601 aa		13.91	□□□□□ -0.18
PTPN23-205	ENST00000495653	CPED1	A4D0V7	1026 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	RGSL1	A5PLK6	1076 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	C5orf60	A6NFR6	353 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	ATP1A1	P05023	1023 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	FGF1	P05230	155 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	PYGL	P06737	847 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	BPI	P17213	487 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	HLA-DPA1	P20036	260 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	SPARCL1	Q14515	664 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	PRPSAP1	Q14558	356 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	GUSBP11	Q6P575	273 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	ARHGEF18	Q6ZSZ5	1173 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	MARK2	Q7KZI7	788 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	TMPRSS7	Q7RTY8	843 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	TAF8	Q7Z7C8	310 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	GKN2	Q86XP6	184 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	SFTPA2	Q8IWL1	248 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	TTC30B	Q8N4P2	665 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	TAB3	Q8N5C8	712 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	KY	Q8NBH2	561 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	BLOC1S5	Q8TDH9	187 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	UBE2Q2	Q8WVN8	375 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	COX14	Q96I36	57 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	SPATA16	Q9BXB7	569 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	GULP1	Q9UBP9	304 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	GPR34	Q9UPC5	381 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	SLC17A4	Q9Y2C5	497 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	AAR2	Q9Y312	384 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	MSRB2	Q9Y3D2	182 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	OAS3	Q9Y6K5	1087 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	MYLK	Q15746	1914 aa		13.9	□□□□□ -0.18
PTPN23-205	ENST00000495653	AKAP13	Q12802	2813 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	FAM221B	A6H8Z2	402 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	C1QTNF9B	B2RNN3	333 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	BUD23	O43709	281 aa	Known RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	LIAS	O43766	372 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	USP12	O75317	370 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	ZNF189	O75820	626 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	METTL18	O95568	372 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	ASMTL	O95671	621 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	C1QTNF9	P0C862	333 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	CXCR5	P32302	372 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	ADRA1A	P35348	466 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	DUSP3	P51452	185 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	DCDC1	P59894	354 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	ILK	Q13418	452 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	SNX1	Q13596	522 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	NR0B2	Q15466	257 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	SMAD1	Q15797	465 aa	Known RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	ZNF648	Q5T619	568 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	HES3	Q5TGS1	186 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	LVRN	Q6Q4G3	990 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	RANBP10	Q6VN20	620 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	GLT6D1	Q7Z4J2	308 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	IFI44	Q8TCB0	444 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	SCG3	Q8WXD2	468 aa	Known RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	ANP32B	Q92688	251 aa	Known RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	GATA6	Q92908	595 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	SRPK1	Q96SB4	655 aa	Known RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	ARFGAP3	Q9NP61	516 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	PLEKHM1	Q9Y4G2	1056 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653	CHD8	Q9HCK8	2581 aa		13.89	□□□□□ -0.19
PTPN23-205	ENST00000495653		B4DGG1	531 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	IVL	P07476	585 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	CDK4	P11802	303 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	AK4	P27144	223 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	HMGCL	P35914	325 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	ADCY8	P40145	1251 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	INSM1	Q01101	510 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	PTPRCAP	Q14761	206 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	SIX1	Q15475	284 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	OASL	Q15646	514 aa	Known RBP	13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	PARP6	Q2NL67	630 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	ZNF569	Q5MCW4	686 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	PERM1	Q5SV97	790 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	NRROS	Q86YC3	692 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	REXO1L1P	Q8IX06	675 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	GALNT15	Q8N3T1	639 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	SDR16C5	Q8N3Y7	309 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	ARL10	Q8N8L6	244 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	FAM46D	Q8NEK8	389 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	GPBAR1	Q8TDU6	330 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	GLMN	Q92990	594 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	SCARF2	Q96GP6	870 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	PDLIM2	Q96JY6	352 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	OR2M4	Q96R27	311 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	TBL1Y	Q9BQ87	522 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	ZSCAN5A	Q9BUG6	496 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	TRABD	Q9H4I3	376 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	RAD18	Q9NS91	495 aa		13.88	□□□□□ -0.19
PTPN23-205	ENST00000495653	EVA1B	Q9NVM1	165 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms