RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CDC25BP30305 580 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 COPS2P61201 443 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 CCL7P80098 99 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 CTBSQ01459 385 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 CERCAMQ5T4B2 595 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 HENMT1Q5T8I9 393 aaKnown RBP33.01■■■□□ 2.87
CBX4-203ENST00000494546 TMEM139Q8IV31 216 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 HTR3CQ8WXA8 447 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 EID2BQ96D98 161 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 COX14Q96I36 57 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 QKIQ96PU8 341 aaKnown RBP eCLIP33.01■■■□□ 2.87
CBX4-203ENST00000494546 OR2M4Q96R27 311 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 CDH19Q9H159 772 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 MAGEE1Q9HCI5 957 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 TAAR2Q9P1P5 351 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 IMPACTQ9P2X3 320 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 ENTPD2Q9Y5L3 495 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 ACACAQ13085 2346 aa33.01■■■□□ 2.87
CBX4-203ENST00000494546 RGSL1A5PLK6 1076 aa33■■■□□ 2.87
CBX4-203ENST00000494546 F5H423 210 aaPredicted RBP33■■■□□ 2.87
CBX4-203ENST00000494546 PJA2O43164 708 aa33■■■□□ 2.87
CBX4-203ENST00000494546 NDST3O95803 873 aa33■■■□□ 2.87
CBX4-203ENST00000494546 RPLP0P05388 317 aaKnown RBP33■■■□□ 2.87
CBX4-203ENST00000494546 GLB1P16278 677 aa33■■■□□ 2.87
CBX4-203ENST00000494546 HLTFQ14527 1009 aaKnown RBP eCLIP33■■■□□ 2.87
CBX4-203ENST00000494546 PID1Q7Z2X4 250 aa33■■■□□ 2.87
CBX4-203ENST00000494546 Q8N9G6 341 aaPredicted RBP33■■■□□ 2.87
CBX4-203ENST00000494546 ZDHHC1Q8WTX9 485 aa33■■■□□ 2.87
CBX4-203ENST00000494546 SCARF2Q96GP6 870 aaPredicted RBP33■■■□□ 2.87
CBX4-203ENST00000494546 FAM153AQ9UHL3 310 aa33■■■□□ 2.87
CBX4-203ENST00000494546 ZNF711Q9Y462 761 aa33■■■□□ 2.87
CBX4-203ENST00000494546 PLEKHM1Q9Y4G2 1056 aa33■■■□□ 2.87
CBX4-203ENST00000494546 RNF215Q9Y6U7 377 aa33■■■□□ 2.87
CBX4-203ENST00000494546 CCDC66A2RUB6 948 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 HACD1B0YJ81 288 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 H7C0C1 242 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 APOC4-APOC2K7ER74 178 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 NTN3O00634 580 aaPredicted RBP32.99■■■□□ 2.87
CBX4-203ENST00000494546 APOC2P02655 101 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 ATP1A1P05023 1023 aaKnown RBP32.99■■■□□ 2.87
CBX4-203ENST00000494546 CTNNA2P26232 953 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 ACTN2P35609 894 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 ATP5OP48047 213 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 C3orf38Q5JPI3 329 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 ALS2CLQ60I27 953 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 ZNF567Q8N184 647 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 GRAMD1AQ96CP6 724 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 GFM1Q96RP9 751 aaKnown RBP32.99■■■□□ 2.87
CBX4-203ENST00000494546 VAT1Q99536 393 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 GPR63Q9BZJ6 419 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 POLR1BQ9H9Y6 1135 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 LRIT1Q9P2V4 623 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 LHX6Q9UPM6 363 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 ST14Q9Y5Y6 855 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 PKD1L2Q7Z442 2459 aa32.99■■■□□ 2.87
CBX4-203ENST00000494546 MACROD2A1Z1Q3 448 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 GRID2IPA4D2P6 1211 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 FADS2P1A8MWK0 482 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 FGF1P05230 155 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 LSSP48449 732 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 MAZP56270 477 aaKnown RBP32.98■■■□□ 2.87
CBX4-203ENST00000494546 RWDD2BP57060 319 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 PYCR3Q53H96 274 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 GALNT13Q8IUC8 556 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 CCNJLQ8IV13 435 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 HERPUD2Q9BSE4 406 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 DESI2Q9BSY9 194 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 OSBPL8Q9BZF1 889 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 LRRN3Q9H3W5 708 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 CNOT6Q9ULM6 557 aaKnown RBP32.98■■■□□ 2.87
CBX4-203ENST00000494546 SATB2Q9UPW6 733 aa32.98■■■□□ 2.87
CBX4-203ENST00000494546 OAS3Q9Y6K5 1087 aaKnown RBP32.98■■■□□ 2.87
CBX4-203ENST00000494546 CFAP47Q6ZTR5 3102 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 ANKRD11Q6UB99 2663 aaPredicted RBP32.97■■■□□ 2.87
CBX4-203ENST00000494546 COL27A1Q8IZC6 1860 aaPredicted RBP32.97■■■□□ 2.87
CBX4-203ENST00000494546 A0A1W2PQM1 296 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 ACTR1BP42025 376 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 PDX1P52945 283 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 ACTR1AP61163 376 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 NOMO1Q15155 1222 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 COL28A1Q2UY09 1125 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 TBC1D25Q3MII6 688 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 TMC3Q7Z5M5 1100 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 LRRC57Q8N9N7 239 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 FGF11Q92914 225 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 SPATA16Q9BXB7 569 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 C10orf88Q9H8K7 445 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 APPL1Q9UKG1 709 aa32.97■■■□□ 2.87
CBX4-203ENST00000494546 URB1O60287 2271 aaKnown RBP32.97■■■□□ 2.87
CBX4-203ENST00000494546 A0A087WV48 116 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 TNNT3P45378 269 aaPredicted RBP32.96■■■□□ 2.87
CBX4-203ENST00000494546 WNT3AP56704 352 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 XRCC4Q13426 336 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 KDELC1Q6UW63 502 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 LSMEM2Q8N112 164 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 GPR26Q8NDV2 337 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 TRIM10Q9UDY6 481 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 ZNHIT2Q9UHR6 403 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 EFR3BQ9Y2G0 817 aa32.96■■■□□ 2.87
CBX4-203ENST00000494546 SPO11Q9Y5K1 396 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms