RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 CAPZA2P47755 286 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CXCR3P49682 368 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 LUMP51884 338 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PRKAA2P54646 552 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 DSCR9P59020 149 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 ACTR1AP61163 376 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 POU3F1Q03052 451 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RUNX1T1Q06455 604 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 GABPB1Q06547 395 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SCN1BQ07699 218 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 KIF5AQ12840 1032 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 IKQ13123 557 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RIPK1Q13546 671 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CAMK2DQ13557 499 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SNX1Q13596 522 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CUL2Q13617 745 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 ITGA7Q13683 1181 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 TNFAIP1Q13829 316 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 STK11Q15831 433 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SMTNL2Q2TAL5 461 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PRICKLE4Q2TBC4 344 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 ZNF805Q5CZA5 627 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 WASHC2DQ5SRD0 308 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 ERMARDQ5T6L9 678 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 C12orf60Q5U649 245 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CES4AQ5XG92 561 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 AP1ARQ63HQ0 302 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PLAG1Q6DJT9 500 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PM20D1Q6GTS8 502 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CENPPQ6IPU0 288 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CAVIN1Q6NZI2 390 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 ARHGAP11AQ6P4F7 1023 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 TRAT1Q6PIZ9 186 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SYNE3Q6ZMZ3 975 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 LINC00696Q6ZRV3 163 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 H1FNTQ75WM6 255 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RNF44Q7L0R7 432 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 LRRC8DQ7L1W4 858 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 BNIPLQ7Z465 357 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 MTERF4Q7Z6M4 381 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 TFAP2DQ7Z6R9 452 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 FAM160B2Q86V87 743 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 FAM217AQ8IXS0 508 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PEX5LQ8IYB4 626 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RTL3Q8N8U3 475 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 GLIS1Q8NBF1 620 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CLEC18CQ8NCF0 446 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 NFKBIDQ8NI38 313 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SETD6Q8TBK2 473 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CCDC110Q8TBZ0 833 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 KCNG4Q8TDN1 519 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SCFD2Q8WU76 684 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RSC1A1Q92681 617 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CASP10Q92851 521 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 LRRC59Q96AG4 307 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 NRBF2Q96F24 287 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 HES6Q96HZ4 224 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 APOPT1Q96IL0 206 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SNX27Q96L92 541 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CNOT6LQ96LI5 555 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 TRAPPC9Q96Q05 1148 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PRPF18Q99633 342 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 WDR83Q9BRX9 315 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PIMREGQ9BSJ6 248 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RTKNQ9BST9 563 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 FUZQ9BT04 418 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 HERC2P3Q9BVR0 1158 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 APOL6Q9BWW8 343 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RNF26Q9BY78 433 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 MAGEB5Q9BZ81 275 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 IQCGQ9H095 443 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 BRD8Q9H0E9 1235 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 INTS2Q9H0H0 1204 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SMARCAD1Q9H4L7 1026 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 C6orf106Q9H6K1 298 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 OPA3Q9H6K4 179 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 VCPKMTQ9H867 229 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 G6PC2Q9NQR9 355 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 GLRX2Q9NS18 164 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 ATAD3AQ9NVI7 634 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PPP1R14DQ9NXH3 145 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 DDX43Q9NXZ2 648 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RGL1Q9NZL6 768 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RGS17Q9UGC6 210 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 FBXO40Q9UH90 709 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 TSPYL4Q9UJ04 414 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CPSF3Q9UKF6 684 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 MYO6Q9UM54 1294 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 HPSEQ9Y251 543 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 POMT1Q9Y6A1 747 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 BRD4O60885 1362 aaPredicted RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ATP8B3O60423 1300 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 EMSYQ7Z589 1322 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 IGSF1Q8N6C5 1336 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TRAV34A0A0B4J273 112 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 A0A1W2PQ09 198 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 A0A1W2PRV1 198 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CTAGE15A4D2H0 777 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ZSCAN5CA6NGD5 496 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms