RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	FEZ2	Q9UHY8	353 aa	Predicted RBP	18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	PLAA	Q9Y263	795 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	FAM208B	Q5VWN6	2430 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	URB1	O60287	2271 aa	Known RBP	18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	SHROOM3	Q8TF72	1996 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	TMEM202	A6NGA9	273 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	RASGRP1	O95267	797 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	GARS	P41250	739 aa	Known RBP	18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	RPL21	P46778	160 aa	Known RBP	18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	KCNJ1	P48048	391 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	GALNT2	Q10471	571 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	KLF1	Q13351	362 aa	Predicted RBP	18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	PAFAH1B3	Q15102	231 aa	Known RBP	18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	UAP1	Q16222	522 aa	Predicted RBP	18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	CNGA3	Q16281	694 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	CDCP2	Q5VXM1	449 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	FAM76A	Q8TAV0	307 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	TBATA	Q96M53	351 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	SMIM14	Q96QK8	99 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	SEMA3C	Q99985	751 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	ZNF670	Q9BS34	389 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	LGR4	Q9BXB1	951 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	DDX56	Q9NY93	547 aa	Known RBP	18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	GRHL1	Q9NZI5	618 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	TTLL3	Q9Y4R7	772 aa		18.79	■□□□□ 0.6
ABCA2-222	ENST00000494046	EME2	A4GXA9	379 aa	Predicted RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	TLX3	O43711	291 aa	Predicted RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PPFIA2	O75334	1257 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	CTPS1	P17812	591 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	LHCGR	P22888	699 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	VIPR1	P32241	457 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PLTP	P55058	493 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	COPS2	P61201	443 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	DHX9	Q08211	1270 aa	Known RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	RTP5	Q14D33	572 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PDK2	Q15119	407 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	ELOC	Q15369	112 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PPP1R7	Q15435	360 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	ZDHHC24	Q6UX98	284 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	MAP7D3	Q8IWC1	876 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	CACTIN-AS1	Q8N1I8	211 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	TEX26	Q8N6G2	289 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PQLC3	Q8N755	202 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	OR1E3	Q8WZA6	343 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	RAPGEF5	Q92565	580 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	COQ10A	Q96MF6	247 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	HERPUD2	Q9BSE4	406 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	TXLNGY	Q9BZA5	131 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	NCKIPSD	Q9NZQ3	722 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	MTRF1L	Q9UGC7	380 aa	Known RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PHTF1	Q9UMS5	762 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	RAI2	Q9Y5P3	530 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	NPIPB15	A6NHN6	443 aa	Predicted RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	CACNB4	O00305	520 aa	Predicted RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	BRINP1	O60477	761 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	CS	O75390	466 aa	Known RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PGLS	O95336	258 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	TNF	P01375	233 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	KRT1	P04264	644 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PDHA1	P08559	390 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	KRT7	P08729	469 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	ALPI	P09923	528 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	ETV3	P41162	512 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	GBE1	Q04446	702 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	LLGL1	Q15334	1064 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	CCNG2	Q16589	344 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	FAM182A	Q5T1J6	154 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	ARMC12	Q5T9G4	340 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PNCK	Q6P2M8	343 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	HSD11B1L	Q7Z5J1	315 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	TSPAN33	Q86UF1	283 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	LRRC49	Q8IUZ0	686 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	FSTL5	Q8N475	847 aa	Predicted RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	OR56A4	Q8NGH8	313 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	ATL2	Q8NHH9	583 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	UBLCP1	Q8WVY7	318 aa	Predicted RBP	18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	GLMN	Q92990	594 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	ARL8A	Q96BM9	186 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	NUS1	Q96E22	293 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	PKNOX2	Q96KN3	472 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	DEPDC7	Q96QD5	511 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	HEMGN	Q9BXL5	484 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	FGF22	Q9HCT0	170 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	MOSPD1	Q9UJG1	213 aa		18.78	■□□□□ 0.6
ABCA2-222	ENST00000494046	ASXL3	Q9C0F0	2248 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	MATN3	O15232	486 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	USP12	O75317	370 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	MPO	P05164	745 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	PTPN7	P35236	360 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	RPIA	P49247	311 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	LMAN1	P49257	510 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	DSC2	Q02487	901 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	SLC10A2	Q12908	348 aa	Predicted RBP	18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	SNX1	Q13596	522 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	IHH	Q14623	411 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	KCTD19	Q17RG1	926 aa	Predicted RBP	18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	ODF2	Q5BJF6	829 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	TTMP	Q5BVD1	217 aa		18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	ESRP1	Q6NXG1	681 aa	Known RBP	18.77	■□□□□ 0.6
ABCA2-222	ENST00000494046	KY	Q8NBH2	561 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms