RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TSSK4Q6SA08 328 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 DSTYKQ6XUX3 929 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 SEPT14Q6ZU15 432 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 TMTC3Q6ZXV5 915 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 HAPLN4Q86UW8 402 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 KMT5CQ86Y97 462 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 ARHGAP12Q8IWW6 846 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.19□□□□□ -1.74
ITGB1-216ENST00000493758 HACE1Q8IYU2 909 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 RNF168Q8IYW5 571 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-216ENST00000493758 LMNTD1Q8N9Z9 388 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 SMARCE1Q969G3 411 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 CDCA5Q96FF9 252 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 GRAMD2BQ96HH9 432 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 QRFPRQ96P65 431 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 SEPT5Q99719 369 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-216ENST00000493758 PCGF1Q9BSM1 259 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 SLC26A6Q9BXS9 759 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 VPS33BQ9H267 617 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 MUC13Q9H3R2 512 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 PDZD7Q9H5P4 517 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 PCDHB16Q9NRJ7 776 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 TXLNGQ9NUQ3 528 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 PADI3Q9ULW8 664 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 ADAM18Q9Y3Q7 739 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 ASPDHA6ND91 283 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 SCAMP1O15126 338 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 CAMTA2O94983 1202 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 DDX58O95786 925 aaKnown RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 CDH1P12830 882 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 UGT1A1P22309 533 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 CORO1AP31146 461 aaKnown RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 ZNF132P52740 706 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 F2RL1P55085 397 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 EEF1A1P68104 462 aaKnown RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 MRPS34P82930 218 aaKnown RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 NIPAL4Q0D2K0 466 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 GRIK2Q13002 908 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 TBCEQ15813 527 aaPredicted RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 MYLK3Q32MK0 819 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 EEF1A1P5Q5VTE0 462 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 DUS1LQ6P1R4 473 aaKnown RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 NCEH1Q6PIU2 408 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 PAPD4Q6PIY7 484 aaKnown RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 GSG1LQ6UXU4 331 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 ZNF704Q6ZNC4 412 aaPredicted RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 TSPAN33Q86UF1 283 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 NFE4Q86UQ8 179 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 DCUN1D3Q8IWE4 304 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 ODF3L1Q8IXM7 274 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 ADSSL1Q8N142 457 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 DUSP19Q8WTR2 217 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 SLC20A1Q8WUM9 679 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 PIGTQ969N2 578 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 RHBDF1Q96CC6 855 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 PERPQ96FX8 193 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 UHRF2Q96PU4 802 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 CSTL1Q9H114 145 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 SIL1Q9H173 461 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 PDCL3Q9H2J4 239 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 SEBOXQ9HB31 216 aaPredicted RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 LIMA1Q9UHB6 759 aaKnown RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 PADI1Q9ULC6 663 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 TMEM184BQ9Y519 407 aaPredicted RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 MAU2Q9Y6X3 613 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 PTPRCP08575 1304 aa4.18□□□□□ -1.74
ITGB1-216ENST00000493758 PDS5AQ29RF7 1337 aaKnown RBP4.18□□□□□ -1.74
ITGB1-216ENST00000493758 JRKO75564 520 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 SCGB1D1O95968 90 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 EGFP01133 1207 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 HSPA1AP0DMV8 641 aaKnown RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 HSPA1BP0DMV9 641 aaKnown RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 KRT10P13645 584 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 ITGA2P17301 1181 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 PBX3P40426 434 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 APOBEC1P41238 236 aaKnown RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 ACSM2AQ08AH3 577 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 MAD2L1Q13257 205 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 DCTN2Q13561 401 aaKnown RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 DCST1Q5T197 706 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 CYP20A1Q6UW02 462 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 MEX3BQ6ZN04 569 aaKnown RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 ASB18Q6ZVZ8 466 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 ZNF34Q8IZ26 560 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 SRBD1Q8N5C6 995 aaKnown RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 OR5R1Q8NH85 324 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 TRPC4APQ8TEL6 797 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 NR4A3Q92570 626 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 CD101Q93033 1021 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 ORAI1Q96D31 301 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 INPP4AQ96PE3 977 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 SYT17Q9BSW7 474 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 LRRC1Q9BTT6 524 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 ABCF3Q9NUQ8 709 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 CWC15Q9P013 229 aaKnown RBP4.17□□□□□ -1.74
ITGB1-216ENST00000493758 FBXW11Q9UKB1 542 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 KCNE2Q9Y6J6 123 aa4.17□□□□□ -1.74
ITGB1-216ENST00000493758 A0A087X0M5 115 aa4.16□□□□□ -1.74
ITGB1-216ENST00000493758 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.16□□□□□ -1.74
ITGB1-216ENST00000493758 A0A1B0GX30 115 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms