RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	PYCARD	Q9ULZ3	195 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	ERI2	A8K979	691 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	LMO7DN	F2Z398	122 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	CES2	O00748	559 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	FFAR2	O15552	330 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	PPFIA2	O75334	1257 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	TRIM16	O95361	564 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	SOD1	P00441	154 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	IFNB1	P01574	187 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	SLC4A1	P02730	911 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	ATP1A1	P05023	1023 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	FDFT1	P37268	417 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	PDE1B	Q01064	536 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	KCTD11	Q693B1	232 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	LVRN	Q6Q4G3	990 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	GSTA5	Q7RTV2	222 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	RD3	Q7Z3Z2	195 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	GLT6D1	Q7Z4J2	308 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	LINC00523	Q86TU6	105 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	SLCO6A1	Q86UG4	719 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	RBFA	Q8N0V3	343 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	CHCHD4	Q8N4Q1	142 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	PNPLA1	Q8N8W4	532 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	SCG3	Q8WXD2	468 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	OR1E3	Q8WZA6	343 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	GATA6	Q92908	595 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	GLMN	Q92990	594 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	PLEKHG4B	Q96PX9	1271 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	WDR24	Q96S15	920 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	OSBPL9	Q96SU4	736 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	LRRC61	Q9BV99	259 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	FGF22	Q9HCT0	170 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	PAK5	Q9P286	719 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	SNX12	Q9UMY4	172 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	PKP3	Q9Y446	797 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	CACNA1B	Q00975	2339 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	ASPM	Q8IZT6	3477 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	LRP4	O75096	1905 aa		13.74	□□□□□ -0.21
PTPN7-215	ENST00000492451	PRSS38	A1L453	326 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	C2orf81	A6NN90	581 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	USP27X	A6NNY8	438 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	PGRMC1	O00264	195 aa	Known RBP	13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	TRIM38	O00635	465 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	AURKA	O14965	403 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	SIGLEC6	O43699	453 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	CRTAM	O95727	393 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	AP2A1	O95782	977 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	CEACAM5	P06731	702 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	ANXA6	P08133	673 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	GIMD1	P0DJR0	217 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	CDK4	P11802	303 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	CKMT2	P17540	419 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	GNG11	P61952	73 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	TAF1A	Q15573	450 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	PROX2	Q3B8N5	592 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	GKN2	Q86XP6	184 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	TTC30B	Q8N4P2	665 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	TRAM1L1	Q8N609	369 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	FAM181A	Q8N9Y4	354 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	GPR26	Q8NDV2	337 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	DTX3L	Q8TDB6	740 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	BRSK1	Q8TDC3	778 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	PDXP	Q96GD0	296 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	COX14	Q96I36	57 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	AGAP2	Q99490	1192 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	APOL2	Q9BQE5	337 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	SPATA16	Q9BXB7	569 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	CAAP1	Q9H8G2	361 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	CYP4F12	Q9HCS2	524 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	TOR4A	Q9NXH8	423 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	MOSPD1	Q9UJG1	213 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	DOLK	Q9UPQ8	538 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	SLC17A4	Q9Y2C5	497 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451	IGF2R	P11717	2491 aa		13.73	□□□□□ -0.21
PTPN7-215	ENST00000492451		E7EVH7	732 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	INPP4B	O15327	924 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	USP12	O75317	370 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	IVL	P07476	585 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	FTH1P19	P0C7X4	201 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	BPI	P17213	487 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	TCP1	P17987	556 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	LPO	P22079	712 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	LMAN1	P49257	510 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	DUSP3	P51452	185 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	ILK	Q13418	452 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	C1orf61	Q13536	156 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	PEX6	Q13608	980 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	ALS2CL	Q60I27	953 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	DENND5A	Q6IQ26	1287 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	UNQ6494/PRO21346	Q6UXR6	183 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	PDCD7	Q8N8D1	485 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	PRELID2	Q8N945	189 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	ACTRT1	Q8TDG2	376 aa		13.72	□□□□□ -0.21

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