RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 OR4D9Q8NGE8 314 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 PNPLA2Q96AD5 504 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 RTP4Q96DX8 246 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 COQ10AQ96MF6 247 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 PCDHB18PQ96TA0 734 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 GSDMCQ9BYG8 508 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 FRMD8Q9BZ67 464 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 SUDS3Q9H7L9 328 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 CATSPERBQ9H7T0 1116 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 TRNAU1APQ9NX07 287 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 SLC39A1Q9NY26 324 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 TMEM9Q9P0T7 183 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 MAP10Q9P2G4 905 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 CROTQ9UKG9 612 aa11.66□□□□□ -0.54
CACNA1C-228ENST00000492150 IGHV1OR21-1A0A087WYE8 117 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 PDE2AO00408 941 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 INPP4BO15327 924 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 FGF10O15520 208 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 DPM1O60762 260 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 FURINP09958 794 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 THRAP10827 490 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 MYCLP1P12525 358 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 CSTF2P33240 577 aaKnown RBP eCLIP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 MAN1A1P33908 653 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 PAPOLAP51003 745 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 NDST2P52849 883 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 CTBSQ01459 385 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 BCL2L1Q07817 233 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 ILF3Q12906 894 aaKnown RBP eCLIP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 ACOX1Q15067 660 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 TPD52L1Q16890 204 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 SCYL2Q6P3W7 929 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 SLC30A9Q6PML9 568 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 BMPERQ8N8U9 685 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 MLKLQ8NB16 471 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 SNRNP40Q96DI7 357 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 CELF6Q96J87 481 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 RANBP9Q96S59 729 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 ZPBPQ9BS86 351 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 SLC25A23Q9BV35 468 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 TEX101Q9BY14 249 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 SLC39A8Q9C0K1 460 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 GANQ9H2C0 597 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 CHST11Q9NPF2 352 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 ADAM22Q9P0K1 906 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 B4GALT6Q9UBX8 382 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 SUFUQ9UMX1 484 aa11.65□□□□□ -0.54
CACNA1C-228ENST00000492150 ACANP16112 2415 aa11.65□□□□□ -0.55
CACNA1C-228ENST00000492150 STAB1Q9NY15 2570 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 TCRBV5S1A1TA0A578 114 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 SIGLEC16A6NMB1 481 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 PES1O00541 588 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 ZW10O43264 779 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 ZG16O60844 167 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 PALMO75781 387 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 MAP3K6O95382 1288 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 GNPDA1P46926 289 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 POLD2P49005 469 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 ZNF143P52747 638 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 ITGA1P56199 1179 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 POLR2LP62875 67 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 NSUN2Q08J23 767 aaKnown RBP eCLIP11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 CNGA3Q16281 694 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 ANKS6Q68DC2 871 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 SLC6A19Q695T7 634 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 KDELC2Q7Z4H8 507 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 CBARPQ8N350 705 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 GLIS1Q8NBF1 620 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 C3orf20Q8ND61 904 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 NUS1Q96E22 293 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 C19orf60Q96EN9 201 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 SELENOOQ9BVL4 669 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 PHPT1Q9NRX4 125 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 PDP2Q9P2J9 529 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 COPG2Q9UBF2 871 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 ZNF451Q9Y4E5 1061 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 PLEKHM1Q9Y4G2 1056 aa11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 MRPS18BQ9Y676 258 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-228ENST00000492150 ARHGAP42A6NI28 874 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 GRID2O43424 1007 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 DNAJB5O75953 348 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 COX6B1P14854 86 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 F8A1P23610 371 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 ADCY8P40145 1251 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 AIF1P55008 147 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 JAM2P57087 298 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 TPI1P60174 286 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 RPL7AP62424 266 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 ERV3-1Q14264 604 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 CLEC16AQ2KHT3 1053 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 TMEM71Q6P5X7 295 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 TRIM72Q6ZMU5 477 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 ARHGAP36Q6ZRI8 547 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 TAOK1Q7L7X3 1001 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 CXXC5Q7LFL8 322 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 FAM129CQ86XR2 697 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 PHF13Q86YI8 300 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 ARHGAP12Q8IWW6 846 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 ZNF295-AS1Q8N0V1 137 aa11.63□□□□□ -0.55
CACNA1C-228ENST00000492150 ESX1Q8N693 406 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms