RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ASCL2Q99929 193 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 LMAN2LQ9H0V9 348 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 MAP3K20Q9NYL2 800 aaKnown RBP3.77□□□□□ -1.81
PHC3-213ENST00000491258 SRP68Q9UHB9 627 aaKnown RBP3.77□□□□□ -1.81
PHC3-213ENST00000491258 SUFUQ9UMX1 484 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 OR2W1Q9Y3N9 320 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 RNF215Q9Y6U7 377 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 LRRIQ1Q96JM4 1722 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 NAIPQ13075 1403 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 RRBP1Q9P2E9 1410 aaKnown RBP3.77□□□□□ -1.81
PHC3-213ENST00000491258 MYO3AQ8NEV4 1616 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 SUPT6HQ7KZ85 1726 aaKnown RBP3.76□□□□□ -1.81
PHC3-213ENST00000491258 MROH2AA6NES4 1674 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 TET3O43151 1660 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 KRTAP16-1A8MUX0 517 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 ANP32CO43423 234 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 CAND2O75155 1236 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 MYL1P05976 194 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 SP100P23497 879 aaPredicted RBP3.76□□□□□ -1.81
PHC3-213ENST00000491258 AARSP49588 968 aaKnown RBP eCLIP3.76□□□□□ -1.81
PHC3-213ENST00000491258 CSRP3P50461 194 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 ISL1P61371 349 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 GNB1P62873 340 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 CCDC96Q2M329 555 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 FAM83BQ5T0W9 1011 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 ATF7IPQ6VMQ6 1270 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 STPG4Q8N801 248 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 RAB40AQ8WXH6 277 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 STAMBPL1Q96FJ0 436 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 SIN3AQ96ST3 1273 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 SYT17Q9BSW7 474 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 PDZD7Q9H5P4 517 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 ZNF624Q9P2J8 865 aaPredicted RBP3.76□□□□□ -1.81
PHC3-213ENST00000491258 CTNNAL1Q9UBT7 734 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 CARD8Q9Y2G2 431 aa3.76□□□□□ -1.81
PHC3-213ENST00000491258 RNF17Q9BXT8 1623 aaKnown RBP3.76□□□□□ -1.81
PHC3-213ENST00000491258 CLTCQ00610 1675 aaKnown RBP3.75□□□□□ -1.81
PHC3-213ENST00000491258 NKTRP30414 1462 aaKnown RBP3.75□□□□□ -1.81
PHC3-213ENST00000491258 DEPDC5O75140 1603 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 PTPN23Q9H3S7 1636 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 PABPN1LA6NDY0 278 aaKnown RBP3.75□□□□□ -1.81
PHC3-213ENST00000491258 PER2O15055 1255 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 CSTBP04080 98 aaKnown RBP3.75□□□□□ -1.81
PHC3-213ENST00000491258 ETFAP13804 333 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 CORO1AP31146 461 aaKnown RBP3.75□□□□□ -1.81
PHC3-213ENST00000491258 CLK1P49759 484 aaKnown RBP3.75□□□□□ -1.81
PHC3-213ENST00000491258 PDE1BQ01064 536 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 CHRNDQ07001 517 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 EIF2S3LQ2VIR3 472 aaKnown RBP3.75□□□□□ -1.81
PHC3-213ENST00000491258 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 ANKRD54Q6NXT1 300 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 ASB18Q6ZVZ8 466 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 MTSS1LQ765P7 747 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 NOXA1Q86UR1 476 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 SH3KBP1Q96B97 665 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 TWNKQ96RR1 684 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 CMKLR1Q99788 373 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 CRB3Q9BUF7 120 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.75□□□□□ -1.81
PHC3-213ENST00000491258 SLC52A3Q9NQ40 469 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 DDX4Q9NQI0 724 aaKnown RBP3.75□□□□□ -1.81
PHC3-213ENST00000491258 SLC7A10Q9NS82 523 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 PAK5Q9P286 719 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 DERAQ9Y315 318 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 HFM1A2PYH4 1435 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 ADGBQ8N7X0 1667 aa3.75□□□□□ -1.81
PHC3-213ENST00000491258 GOLGA6L9A6NEM1 432 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 NR5A2O00482 541 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 IGLV1-44P01699 117 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 CYC1P08574 325 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 DDIT3P35638 169 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 DCTP40126 519 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 GTF2H2Q13888 395 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 SPINK14Q6IE38 97 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 GTF2H2CQ6P1K8 395 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 KCTD18Q6PI47 426 aaPredicted RBP3.74□□□□□ -1.81
PHC3-213ENST00000491258 APLFQ8IW19 511 aaPredicted RBP3.74□□□□□ -1.81
PHC3-213ENST00000491258 CACNA2D3Q8IZS8 1091 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 OR2AK2Q8NG84 335 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 FBXL8Q96CD0 374 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 CCDC136Q96JN2 1154 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 ART5Q96L15 291 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 MTERF1Q99551 399 aaKnown RBP3.74□□□□□ -1.81
PHC3-213ENST00000491258 WDR13Q9H1Z4 485 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 EPHX3Q9H6B9 360 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 ESRP2Q9H6T0 727 aaKnown RBP3.74□□□□□ -1.81
PHC3-213ENST00000491258 ARNT2Q9HBZ2 717 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 STK26Q9P289 416 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 ZNF142P52746 1687 aaPredicted RBP3.74□□□□□ -1.81
PHC3-213ENST00000491258 ABCC11Q96J66 1382 aa3.74□□□□□ -1.81
PHC3-213ENST00000491258 LRP5O75197 1615 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 EIF2AK4Q9P2K8 1649 aaKnown RBP3.73□□□□□ -1.81
PHC3-213ENST00000491258 AFF2P51816 1311 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 SYNMO15061 1565 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 DCCP43146 1447 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 SETD5Q9C0A6 1442 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 BCAT2O15382 392 aaPredicted RBP3.73□□□□□ -1.81
PHC3-213ENST00000491258 CAVIN2O95810 425 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms