RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 Q8N9G6 341 aaPredicted RBP31.19■■■□□ 2.58
LDB1-204ENST00000490751 ZDHHC1Q8WTX9 485 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 TFB1MQ8WVM0 346 aaKnown RBP31.19■■■□□ 2.58
LDB1-204ENST00000490751 TADA1Q96BN2 335 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 CRELD1Q96HD1 420 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 COX14Q96I36 57 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 OR2M4Q96R27 311 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 WDR24Q96S15 920 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 CDH19Q9H159 772 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 GLOD4Q9HC38 313 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 ASCL3Q9NQ33 180 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 ST14Q9Y5Y6 855 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 hCG_1818297A0A087WSY0 165 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 ZRANB2O95218 330 aaKnown RBP eCLIP31.18■■■□□ 2.58
LDB1-204ENST00000490751 FGF1P05230 155 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 PNLIPP16233 465 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 FECHP22830 423 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 MAZP56270 477 aaKnown RBP31.18■■■□□ 2.58
LDB1-204ENST00000490751 MARK2Q7KZI7 788 aaKnown RBP31.18■■■□□ 2.58
LDB1-204ENST00000490751 LYSMD3Q7Z3D4 306 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 B3GNT8Q7Z7M8 397 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 TMTC1Q8IUR5 882 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 RCOR2Q8IZ40 523 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 SPATA22Q8NHS9 363 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 SBDSQ9Y3A5 250 aaKnown RBP eCLIP31.18■■■□□ 2.58
LDB1-204ENST00000490751 PLEKHM1Q9Y4G2 1056 aa31.18■■■□□ 2.58
LDB1-204ENST00000490751 NUDT21O43809 227 aaKnown RBP31.17■■■□□ 2.58
LDB1-204ENST00000490751 MT-CYBP00156 380 aaPredicted RBP31.17■■■□□ 2.58
LDB1-204ENST00000490751 PCBP4P57723 403 aaKnown RBP31.17■■■□□ 2.58
LDB1-204ENST00000490751 ERVPABLB-1P60509 514 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 CDK18Q07002 472 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 CCDC173Q0VFZ6 552 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 SLC14A2Q15849 920 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 HENMT1Q5T8I9 393 aaKnown RBP31.17■■■□□ 2.58
LDB1-204ENST00000490751 FOXR1Q6PIV2 292 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 DAAM2Q86T65 1068 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 WDR36Q8NI36 951 aaKnown RBP31.17■■■□□ 2.58
LDB1-204ENST00000490751 KRT35Q92764 455 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 P3H4Q92791 437 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 RBM41Q96IZ5 413 aaKnown RBP31.17■■■□□ 2.58
LDB1-204ENST00000490751 TEKT5Q96M29 485 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 FAM83DQ9H4H8 585 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 PCDHGA8Q9Y5G5 932 aa31.17■■■□□ 2.58
LDB1-204ENST00000490751 NBEAQ8NFP9 2946 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 ZFC3H1O60293 1989 aaKnown RBP31.16■■■□□ 2.58
LDB1-204ENST00000490751 CCDC187A0A096LP49 1063 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 PMS2P1A4D2B8 440 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 RGSL1A5PLK6 1076 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 RCCD1A6NED2 376 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 ASMTLO95671 621 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 PIRTP0C851 137 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 RBMS1P29558 406 aaKnown RBP31.16■■■□□ 2.58
LDB1-204ENST00000490751 PYCR3Q53H96 274 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 IGF2-ASQ6U949 168 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 SPRED1Q7Z699 444 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 C17orf82Q86X59 251 aaPredicted RBP31.16■■■□□ 2.58
LDB1-204ENST00000490751 GAS2L3Q86XJ1 694 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 ZNF248Q8NDW4 579 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 HAUS1Q96CS2 278 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 PRR11Q96HE9 360 aaPredicted RBP31.16■■■□□ 2.58
LDB1-204ENST00000490751 ZFYVE1Q9HBF4 777 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 EPB41L5Q9HCM4 733 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 THSD1Q9NS62 852 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 SHOC2Q9UQ13 582 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 UNC13CQ8NB66 2214 aa31.16■■■□□ 2.58
LDB1-204ENST00000490751 FADS2P1A8MWK0 482 aa31.15■■■□□ 2.58
LDB1-204ENST00000490751 IPO7O95373 1038 aaKnown RBP31.15■■■□□ 2.58
LDB1-204ENST00000490751 ACTR1BP42025 376 aa31.15■■■□□ 2.58
LDB1-204ENST00000490751 ACTR1AP61163 376 aa31.15■■■□□ 2.58
LDB1-204ENST00000490751 WASHC5Q12768 1159 aa31.15■■■□□ 2.58
LDB1-204ENST00000490751 ZC3H18Q86VM9 953 aaKnown RBP31.15■■■□□ 2.58
LDB1-204ENST00000490751 GALNT13Q8IUC8 556 aa31.15■■■□□ 2.58
LDB1-204ENST00000490751 PATE1Q8WXA2 126 aa31.15■■■□□ 2.58
LDB1-204ENST00000490751 EID2BQ96D98 161 aa31.15■■■□□ 2.58
LDB1-204ENST00000490751 LIN37Q96GY3 246 aaPredicted RBP31.15■■■□□ 2.58
LDB1-204ENST00000490751 FOXP3Q9BZS1 431 aa31.15■■■□□ 2.58
LDB1-204ENST00000490751 ATXN7L1Q9ULK2 861 aaPredicted RBP31.15■■■□□ 2.58
LDB1-204ENST00000490751 CNOT6Q9ULM6 557 aaKnown RBP31.15■■■□□ 2.58
LDB1-204ENST00000490751 OAS3Q9Y6K5 1087 aaKnown RBP31.15■■■□□ 2.58
LDB1-204ENST00000490751 PMPCBO75439 489 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 ECEL1O95672 775 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 ATP1A1P05023 1023 aaKnown RBP31.14■■■□□ 2.58
LDB1-204ENST00000490751 INHBCP55103 352 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 PEX6Q13608 980 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 NAF1Q96HR8 494 aaKnown RBP31.14■■■□□ 2.58
LDB1-204ENST00000490751 SLC46A1Q96NT5 459 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 MAGEE1Q9HCI5 957 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 UBP1Q9NZI7 540 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 VPS18Q9P253 973 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 REXO2Q9Y3B8 237 aaKnown RBP31.14■■■□□ 2.58
LDB1-204ENST00000490751 ZNF711Q9Y462 761 aa31.14■■■□□ 2.58
LDB1-204ENST00000490751 MTSS1O43312 755 aa31.13■■■□□ 2.57
LDB1-204ENST00000490751 SLC4A1P02730 911 aa31.13■■■□□ 2.57
LDB1-204ENST00000490751 CD68P34810 354 aaPredicted RBP31.13■■■□□ 2.57
LDB1-204ENST00000490751 PPP2R5EQ16537 467 aa31.13■■■□□ 2.57
LDB1-204ENST00000490751 RAD9BQ6WBX8 426 aa31.13■■■□□ 2.57
LDB1-204ENST00000490751 NAGSQ8N159 534 aa31.13■■■□□ 2.57
LDB1-204ENST00000490751 ARL14Q8N4G2 192 aa31.13■■■□□ 2.57
LDB1-204ENST00000490751 TMEM74Q96NL1 305 aa31.13■■■□□ 2.57
LDB1-204ENST00000490751 TMX2-CTNND1H3BSU7 103 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms