RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 OASLQ15646 514 aaKnown RBP17.25■□□□□ 0.35
MDC1-206ENST00000489540 CCNG2Q16589 344 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 ZDHHC20Q5W0Z9 365 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 PDPK2PQ6A1A2 396 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 KLHDC8BQ8IXV7 354 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 BLOC1S5Q8TDH9 187 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 SCARF2Q96GP6 870 aaPredicted RBP17.25■□□□□ 0.35
MDC1-206ENST00000489540 COX14Q96I36 57 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 ZSCAN5AQ9BUG6 496 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 SPATA16Q9BXB7 569 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 HOMER3Q9NSC5 361 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.25■□□□□ 0.35
MDC1-206ENST00000489540 FEZ2Q9UHY8 353 aaPredicted RBP17.25■□□□□ 0.35
MDC1-206ENST00000489540 AURKAO14965 403 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 HYAL3O43820 417 aaPredicted RBP17.24■□□□□ 0.35
MDC1-206ENST00000489540 KIF5CO60282 957 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 RFPL3O75679 317 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 SLC4A1P02730 911 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 BPIP17213 487 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 ACTN2P35609 894 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 GDF10P55107 478 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 LONRF2Q1L5Z9 754 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 CCDC157Q569K6 752 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 ZNF569Q5MCW4 686 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 C6orf132Q5T0Z8 1188 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 KCTD16Q68DU8 428 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 DRICH1Q6PGQ1 229 aaPredicted RBP17.24■□□□□ 0.35
MDC1-206ENST00000489540 NYAP1Q6ZVC0 841 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 GLT6D1Q7Z4J2 308 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 TTC30BQ8N4P2 665 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 TRAM1L1Q8N609 369 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 PBKQ96KB5 322 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 PLEKHG4BQ96PX9 1271 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 CARS2Q9HA77 564 aaKnown RBP17.24■□□□□ 0.35
MDC1-206ENST00000489540 ARNT2Q9HBZ2 717 aa17.24■□□□□ 0.35
MDC1-206ENST00000489540 TRNAU1APQ9NX07 287 aaKnown RBP17.24■□□□□ 0.35
MDC1-206ENST00000489540 TRMT1Q9NXH9 659 aaKnown RBP17.24■□□□□ 0.35
MDC1-206ENST00000489540 CNOT6Q9ULM6 557 aaKnown RBP17.24■□□□□ 0.35
MDC1-206ENST00000489540 DRG1Q9Y295 367 aaKnown RBP17.24■□□□□ 0.35
MDC1-206ENST00000489540 INPP4BO15327 924 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 PPFIA2O75334 1257 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 METTL18O95568 372 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 CXCR5P32302 372 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 E2F1Q01094 437 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 SNX1Q13596 522 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 SIX1Q15475 284 aaPredicted RBP17.23■□□□□ 0.35
MDC1-206ENST00000489540 TAF8Q7Z7C8 310 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 DTX3LQ8TDB6 740 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 TBL1YQ9BQ87 522 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 SCNM1Q9BWG6 230 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 BOCQ9BWV1 1114 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 TMEM168Q9H0V1 697 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 VPS18Q9P253 973 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 SUFUQ9UMX1 484 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 TMEM98Q9Y2Y6 226 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 PKP3Q9Y446 797 aa17.23■□□□□ 0.35
MDC1-206ENST00000489540 FAM221BA6H8Z2 402 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 C2orf81A6NN90 581 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 FADS2P1A8MWK0 482 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 ASMTLO95671 621 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 TOP3BO95985 862 aaKnown RBP17.22■□□□□ 0.35
MDC1-206ENST00000489540 IFNB1P01574 187 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 FUCA1P04066 466 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 CELA2BP08218 269 aaPredicted RBP17.22■□□□□ 0.35
MDC1-206ENST00000489540 GNPDA1P46926 289 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 POLD2P49005 469 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 NR0B2Q15466 257 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 ALS2CLQ60I27 953 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 KCTD11Q693B1 232 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 DOK6Q6PKX4 331 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 TMPRSS7Q7RTY8 843 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 GALNT15Q8N3T1 639 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 BRSK1Q8TDC3 778 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 GPBAR1Q8TDU6 330 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 APOL2Q9BQE5 337 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 GSDMCQ9BYG8 508 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 LRRC40Q9H9A6 602 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 BPIFA1Q9NP55 256 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 IL17CQ9P0M4 197 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 GPR34Q9UPC5 381 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 NEUROG3Q9Y4Z2 214 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 LRRK1Q38SD2 2015 aa17.22■□□□□ 0.35
MDC1-206ENST00000489540 COL5A1P20908 1838 aaPredicted RBP17.22■□□□□ 0.35
MDC1-206ENST00000489540 LY6G6EA0A0G2JKS1 128 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 ERI2A8K979 691 aaKnown RBP17.21■□□□□ 0.35
MDC1-206ENST00000489540 CRTAMO95727 393 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 GP1BAP07359 652 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 FDFT1P37268 417 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 PDE1BQ01064 536 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 ILF3Q12906 894 aaKnown RBP eCLIP17.21■□□□□ 0.35
MDC1-206ENST00000489540 PEX6Q13608 980 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 SPARCL1Q14515 664 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 TAF1AQ15573 450 aaPredicted RBP17.21■□□□□ 0.35
MDC1-206ENST00000489540 SMAD1Q15797 465 aaKnown RBP17.21■□□□□ 0.35
MDC1-206ENST00000489540 DHRS13Q6UX07 377 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 TRIM74Q86UV6 250 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 TMPRSS12Q86WS5 348 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 SLC35F6Q8N357 371 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 ARL10Q8N8L6 244 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms