RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 SDR16C5Q8N3Y7 309 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 Q8N9P0 234 aaPredicted RBP2.98□□□□□ -1.93
CALD1-221ENST00000489019 ATP11CQ8NB49 1132 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 MCPH1Q8NEM0 835 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 SPATA4Q8NEY3 305 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 MBD3L2Q8NHZ7 208 aaPredicted RBP2.98□□□□□ -1.93
CALD1-221ENST00000489019 CCDC26Q8TAB7 109 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 SUN3Q8TAQ9 357 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 OSR1Q8TAX0 266 aaPredicted RBP2.98□□□□□ -1.93
CALD1-221ENST00000489019 LNX1Q8TBB1 728 aaPredicted RBP2.98□□□□□ -1.93
CALD1-221ENST00000489019 FAM71BQ8TC56 605 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 IFT81Q8WYA0 676 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 RUBCNQ92622 972 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 CCDC127Q96BQ5 260 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 TBC1D20Q96BZ9 403 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 MS4A14Q96JA4 679 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 FAM81BQ96LP2 452 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 C12orf42Q96LP6 360 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 HS6ST2Q96MM7 605 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 GDAP1L1Q96MZ0 367 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 FIZ1Q96SL8 496 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 KRT12Q99456 494 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 AGPAT1Q99943 283 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 CBWD1Q9BRT8 395 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 FAM213AQ9BRX8 229 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 LRRC1Q9BTT6 524 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 KIFC3Q9BVG8 833 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 FUT8Q9BYC5 575 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 POLR3FQ9H1D9 316 aaPredicted RBP2.98□□□□□ -1.93
CALD1-221ENST00000489019 ST6GALNAC4Q9H4F1 302 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 PLEKHA4Q9H4M7 779 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 AZI2Q9H6S1 392 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 SAP30LQ9HAJ7 183 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 C17orf75Q9HAS0 396 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 USP29Q9HBJ7 922 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 PDE11AQ9HCR9 933 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 SIX2Q9NPC8 291 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 HEYLQ9NQ87 328 aaPredicted RBP2.98□□□□□ -1.93
CALD1-221ENST00000489019 VPS45Q9NRW7 570 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 NRBP2Q9NSY0 501 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 DMAC2Q9NW81 257 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 CYP39A1Q9NYL5 469 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 SMARCAL1Q9NZC9 954 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 EHD2Q9NZN4 543 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 FZD4Q9ULV1 537 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 TBX20Q9UMR3 447 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 AFG3L2Q9Y4W6 797 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 CEP83Q9Y592 693 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 FER1L6Q2WGJ9 1857 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 PHIPQ8WWQ0 1821 aa2.98□□□□□ -1.93
CALD1-221ENST00000489019 ATP8B3O60423 1300 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 IGSF9BQ9UPX0 1349 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 GOLGA6L10A0A0M3HER8 536 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 A0A1W2PPC4 97 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 GOLGA6L10A6NI86 522 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 RRN3P2A6NIE6 340 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ZNF233A6NK53 670 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 LRRIQ3A6PVS8 624 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 ANKRD63C9JTQ0 380 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 GOLGA8KD6RF30 607 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 CCDC188H7C350 402 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 K7ERI5 159 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 PGRMC1O00264 195 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 FOXN3O00409 490 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 MAP2K7O14733 419 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 PPEF2O14830 753 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ATP2A1O14983 1001 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 AREL1O15033 823 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 MAPK13O15264 365 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 THAP12O43422 761 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 SPOPO43791 374 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 RTN2O75298 545 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 RNASEH2AO75792 299 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 ERLIN2O94905 339 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 WDR47O94967 919 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 SGPL1O95470 568 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 SLC25A27O95847 323 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TMEM225BP0DP42 221 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 HSD3B1P14060 373 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 MARK3P27448 753 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 GTF2H1P32780 548 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ICAM3P32942 547 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 GALNSP34059 522 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 THBS4P35443 961 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 COPB2P35606 906 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 PIK3CAP42336 1068 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 CASP2P42575 452 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 SSR1P43307 286 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 LMAN1P49257 510 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 MRPS25P82663 173 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 CNTN2Q02246 1040 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 GUCY2DQ02846 1103 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 PPATQ06203 517 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 CYP24A1Q07973 514 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 DNASE1L3Q13609 305 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 VGLL4Q14135 290 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 NEDD9Q14511 834 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 KCTD2Q14681 263 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 MESDQ14696 234 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 EMC2Q15006 297 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms