RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 KLHL8Q9P2G9 620 aaPredicted RBP17.65■□□□□ 0.42
ITGB1-215ENST00000488494 ZNF711Q9Y462 761 aa17.65■□□□□ 0.42
ITGB1-215ENST00000488494 BPTFQ12830 3046 aa17.65■□□□□ 0.42
ITGB1-215ENST00000488494 FADS2P1A8MWK0 482 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 MTSS1O43312 755 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 RPLP0P05388 317 aaKnown RBP17.64■□□□□ 0.41
ITGB1-215ENST00000488494 AK4P27144 223 aaPredicted RBP17.64■□□□□ 0.41
ITGB1-215ENST00000488494 CDC25BP30305 580 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 CD68P34810 354 aaPredicted RBP17.64■□□□□ 0.41
ITGB1-215ENST00000488494 ADCY8P40145 1251 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 HLTFQ14527 1009 aaKnown RBP eCLIP17.64■□□□□ 0.41
ITGB1-215ENST00000488494 C3orf38Q5JPI3 329 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 HENMT1Q5T8I9 393 aaKnown RBP17.64■□□□□ 0.41
ITGB1-215ENST00000488494 CCDC181Q5TID7 509 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 ALS2CLQ60I27 953 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 OGFOD3Q6PK18 319 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 CCNJLQ8IV13 435 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 RAVER1Q8IY67 606 aaKnown RBP17.64■□□□□ 0.41
ITGB1-215ENST00000488494 OR6C4Q8NGE1 309 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 COX14Q96I36 57 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 CALR3Q96L12 384 aaKnown RBP17.64■□□□□ 0.41
ITGB1-215ENST00000488494 HERPUD2Q9BSE4 406 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 DESI2Q9BSY9 194 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 FAM83DQ9H4H8 585 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 SPATS2LQ9NUQ6 558 aaKnown RBP17.64■□□□□ 0.41
ITGB1-215ENST00000488494 TAAR2Q9P1P5 351 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 LHX6Q9UPM6 363 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 SHOC2Q9UQ13 582 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 ENTPD2Q9Y5L3 495 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 ST14Q9Y5Y6 855 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 RNF215Q9Y6U7 377 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 ASXL3Q9C0F0 2248 aa17.64■□□□□ 0.41
ITGB1-215ENST00000488494 A0A087WV48 116 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 GRID2IPA4D2P6 1211 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 HACD1B0YJ81 288 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 D6RAR5 112 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 APOC4-APOC2K7ER74 178 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 NTN3O00634 580 aaPredicted RBP17.63■□□□□ 0.41
ITGB1-215ENST00000488494 PJA2O43164 708 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 NDST3O95803 873 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 APOC2P02655 101 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 ATP1A1P05023 1023 aaKnown RBP17.63■□□□□ 0.41
ITGB1-215ENST00000488494 GLB1P16278 677 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 MAZP56270 477 aaKnown RBP17.63■□□□□ 0.41
ITGB1-215ENST00000488494 COPS2P61201 443 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 CCL7P80098 99 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 CTBSQ01459 385 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 TBC1D25Q3MII6 688 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 NLRP8Q86W28 1048 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 GALNT13Q8IUC8 556 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 ZNF567Q8N184 647 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 Q8N9G6 341 aaPredicted RBP17.63■□□□□ 0.41
ITGB1-215ENST00000488494 LRRC57Q8N9N7 239 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 ZDHHC1Q8WTX9 485 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 HNRNPLLQ8WVV9 542 aaKnown RBP17.63■□□□□ 0.41
ITGB1-215ENST00000488494 HTR3CQ8WXA8 447 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 EID2BQ96D98 161 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 SCARF2Q96GP6 870 aaPredicted RBP17.63■□□□□ 0.41
ITGB1-215ENST00000488494 GFM1Q96RP9 751 aaKnown RBP17.63■□□□□ 0.41
ITGB1-215ENST00000488494 POLR1BQ9H9Y6 1135 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 ZFYVE1Q9HBF4 777 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 TRIM10Q9UDY6 481 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 SATB2Q9UPW6 733 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 PCDHA3Q9Y5H8 950 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 OAS3Q9Y6K5 1087 aaKnown RBP17.63■□□□□ 0.41
ITGB1-215ENST00000488494 FAM208BQ5VWN6 2430 aa17.63■□□□□ 0.41
ITGB1-215ENST00000488494 RP1P56715 2156 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 A0A1W2PNU3 283 aaPredicted RBP17.62■□□□□ 0.41
ITGB1-215ENST00000488494 CCDC66A2RUB6 948 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 PMS2P1A4D2B8 440 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 RGSL1A5PLK6 1076 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 H7C0C1 242 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 ASMTLO95671 621 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 CTNNA2P26232 953 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 ACTN2P35609 894 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 ACTR1BP42025 376 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 ATP5OP48047 213 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 WNT3AP56704 352 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 DCDC1P59894 354 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 ACTR1AP61163 376 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 NOMO1Q15155 1222 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 COL28A1Q2UY09 1125 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 ZNF569Q5MCW4 686 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 KDELC1Q6UW63 502 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 SPRED1Q7Z699 444 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 B3GNT8Q7Z7M8 397 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 SNIP1Q8TAD8 396 aaKnown RBP17.62■□□□□ 0.41
ITGB1-215ENST00000488494 ALG3Q92685 438 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 GPR63Q9BZJ6 419 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 C10orf88Q9H8K7 445 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 MAGEE1Q9HCI5 957 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 LRIT1Q9P2V4 623 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 IMPACTQ9P2X3 320 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 FAM153AQ9UHL3 310 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 RSPH14Q9UHP6 348 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 CNOT6Q9ULM6 557 aaKnown RBP17.62■□□□□ 0.41
ITGB1-215ENST00000488494 PLEKHM1Q9Y4G2 1056 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 SPO11Q9Y5K1 396 aa17.62■□□□□ 0.41
ITGB1-215ENST00000488494 A0A0U1RQJ8 604 aa17.61■□□□□ 0.41
ITGB1-215ENST00000488494 A0A1W2PQM1 296 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms