RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 MTSS1O43312 755 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 PMPCBO75439 489 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 ASMTLO95671 621 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 FGF1P05230 155 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 RPLP0P05388 317 aaKnown RBP11.38□□□□□ -0.59
SPEN-205ENST00000487496 PIRTP0C851 137 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 PNLIPP16233 465 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 GLB1P16278 677 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 CTNNA1P35221 906 aaKnown RBP11.38□□□□□ -0.59
SPEN-205ENST00000487496 ACTN2P35609 894 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 ADCY8P40145 1251 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 EIF2S3P41091 472 aaKnown RBP11.38□□□□□ -0.59
SPEN-205ENST00000487496 LSSP48449 732 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 VAV2P52735 878 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 PDX1P52945 283 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 GABREP78334 506 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 CCL7P80098 99 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 CTBSQ01459 385 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 HLTFQ14527 1009 aaKnown RBP eCLIP11.38□□□□□ -0.59
SPEN-205ENST00000487496 COL28A1Q2UY09 1125 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 TBC1D25Q3MII6 688 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 PYCR3Q53H96 274 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 HENMT1Q5T8I9 393 aaKnown RBP11.38□□□□□ -0.59
SPEN-205ENST00000487496 BBS12Q6ZW61 710 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 MARK2Q7KZI7 788 aaKnown RBP11.38□□□□□ -0.59
SPEN-205ENST00000487496 C17orf82Q86X59 251 aaPredicted RBP11.38□□□□□ -0.59
SPEN-205ENST00000487496 TMEM139Q8IV31 216 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 LSMEM2Q8N112 164 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 SNIP1Q8TAD8 396 aaKnown RBP11.38□□□□□ -0.59
SPEN-205ENST00000487496 KIAA1524Q8TCG1 905 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 HTR3CQ8WXA8 447 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 ATXN7L3BQ96GX2 97 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 VAT1Q99536 393 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 HERPUD2Q9BSE4 406 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 LRRN3Q9H3W5 708 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 POLR1BQ9H9Y6 1135 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 MAGEE1Q9HCI5 957 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 UBP1Q9NZI7 540 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 KLHL8Q9P2G9 620 aaPredicted RBP11.38□□□□□ -0.59
SPEN-205ENST00000487496 LRIT1Q9P2V4 623 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 APPL1Q9UKG1 709 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 LHX6Q9UPM6 363 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 SHOC2Q9UQ13 582 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 PLEKHM1Q9Y4G2 1056 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 RNF215Q9Y6U7 377 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 ZZEF1O43149 2961 aa11.38□□□□□ -0.59
SPEN-205ENST00000487496 FADS2P1A8MWK0 482 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 HACD1B0YJ81 288 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 NUDT21O43809 227 aaKnown RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 DXOO77932 396 aaKnown RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 NDST3O95803 873 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 ATP1A1P05023 1023 aaKnown RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 NFKB1P19838 968 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 CTNNA2P26232 953 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 CDC25BP30305 580 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 MAZP56270 477 aaKnown RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 COPS2P61201 443 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 C3orf38Q5JPI3 329 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 CCDC70Q6NSX1 233 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 SLC30A9Q6PML9 568 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 PID1Q7Z2X4 250 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 TMC3Q7Z5M5 1100 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 CCNJLQ8IV13 435 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 ZNF567Q8N184 647 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 Q8N9G6 341 aaPredicted RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 LRRC57Q8N9N7 239 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 ZDHHC1Q8WTX9 485 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 ZNF578Q96N58 590 aaPredicted RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 QKIQ96PU8 341 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPEN-205ENST00000487496 OR2M4Q96R27 311 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 FCRL5Q96RD9 977 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 GFM1Q96RP9 751 aaKnown RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 GPR63Q9BZJ6 419 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 CDH19Q9H159 772 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 FAM153AQ9UHL3 310 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 SATB2Q9UPW6 733 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 EFR3BQ9Y2G0 817 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 ZNF711Q9Y462 761 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 SPO11Q9Y5K1 396 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 PCYT1BQ9Y5K3 369 aaPredicted RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 OAS3Q9Y6K5 1087 aaKnown RBP11.37□□□□□ -0.59
SPEN-205ENST00000487496 CHD6Q8TD26 2715 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 LAMA5O15230 3695 aa11.37□□□□□ -0.59
SPEN-205ENST00000487496 COL27A1Q8IZC6 1860 aaPredicted RBP11.36□□□□□ -0.59
SPEN-205ENST00000487496 CELSR3Q9NYQ7 3312 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 LOC285095A0A1B0GVY8 99 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 CCDC66A2RUB6 948 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 GRID2IPA4D2P6 1211 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 D6RAR5 112 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 APOC4-APOC2K7ER74 178 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 DNAJC6O75061 913 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 ECEL1O95672 775 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 EPOP01588 193 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 APOC2P02655 101 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 PTPN7P35236 360 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 ACTR1BP42025 376 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 WNT3AP56704 352 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 RWDD2BP57060 319 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms