RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PAF1Q8N7H5 531 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 GPATCH11Q8N954 259 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 ACVR1CQ8NER5 493 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 RPLP0P6Q8NHW5 317 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 PIH1D2Q8WWB5 315 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 C19orf43Q9BQ61 176 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 TSSK1BQ9BXA7 367 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 TNKS2Q9H2K2 1166 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 SLCO1B3Q9NPD5 702 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 C2orf42Q9NWW7 574 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 ZSCAN32Q9NX65 697 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 FBXO10Q9UK96 956 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 ARL2BPQ9Y2Y0 163 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 A0A087X1B8 175 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 A0A1W2PQ67 120 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 OR51F1A6NGY5 319 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 CHURC1-FNTBB4DL54 471 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 PROB1E7EW31 1015 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 TRAFD1O14545 582 aaPredicted RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 AURKAO14965 403 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 PFDN6O15212 129 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 STX7O15400 261 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 TROVE2P10155 538 aaKnown RBP eCLIP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 POLR2EP19388 210 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 KCNA4P22459 653 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 NNMTP40261 264 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 STK19P49842 368 aaPredicted RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 KPNA2P52292 529 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 KDSRQ06136 332 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 MESP2Q0VG99 397 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 PTPRCAPQ14761 206 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 MYLK3Q32MK0 819 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 FASTKD1Q53R41 847 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 C2orf27AQ580R0 203 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 CARD16Q5EG05 197 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 MBLAC2Q68D91 279 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 CGB2Q6NT52 195 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 OTOAQ7RTW8 1153 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 YTHDF3Q7Z739 585 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 ADIPOR2Q86V24 386 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 ALYREFQ86V81 257 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 PLPP6Q8IY26 295 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 PLD6Q8N2A8 252 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 TTC30BQ8N4P2 665 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 OR6K2Q8NGY2 324 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 WFIKKN2Q8TEU8 576 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 TCF12Q99081 682 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 OMDQ99983 421 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 MECRQ9BV79 373 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 CPEB1Q9BZB8 566 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 SUDS3Q9H7L9 328 aaPredicted RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 NMRAL1Q9HBL8 299 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 INTS10Q9NVR2 710 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 KLHL14Q9P2G3 628 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 HECAQ9UBI9 543 aaPredicted RBP14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 SLC8A2Q9UPR5 921 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 ZNF711Q9Y462 761 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 PCDHGA2Q9Y5H1 932 aa14.56□□□□□ -0.08
POLR2J3-204ENST00000486319 A0A0J9YYE9 177 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 H7C0S8 307 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 PHGDHO43175 533 aaKnown RBP14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 KIAA0754O94854 1291 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 PIGNO95427 931 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 TGDSO95455 350 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 POP4O95707 220 aaKnown RBP14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 TRBC1P01850 177 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 SLC35E2BP0CK96 405 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 PMLP29590 882 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 HMGCLP35914 325 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 TNFRSF4P43489 277 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 DGKGP49619 791 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 VASPP50552 380 aaPredicted RBP14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 STC1P52823 247 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 TAS2R39P59534 338 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 IRX4P78413 519 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 IRF9Q00978 393 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 CHI3L2Q15782 390 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 TYSND1Q2T9J0 566 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 TSNAXIP1Q2TAA8 658 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 ACCSLQ4AC99 568 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 FAM45BPQ6NSW5 357 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 SFTPA1Q8IWL2 248 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 PPP1R14CQ8TAE6 165 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 RDH11Q8TC12 318 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 FAM45AQ8TCE6 357 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 SREK1Q8WXA9 508 aaKnown RBP14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 NELL1Q92832 810 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 GPR63Q9BZJ6 419 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 MARCH4Q9P2E8 410 aaPredicted RBP14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 COPG2Q9UBF2 871 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 ERVW-1Q9UQF0 538 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 VPS9D1Q9Y2B5 631 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 PKP3Q9Y446 797 aa14.55□□□□□ -0.08
POLR2J3-204ENST00000486319 K7ESF4 209 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 TRIM24O15164 1050 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 KLHL2O95198 593 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 SLC4A1P02730 911 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 ASLP04424 464 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 TDGF1P13385 188 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms