RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CTRCQ99895 268 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 DDX50Q9BQ39 737 aaKnown RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 NUDT22Q9BRQ3 303 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 DDA1Q9BW61 102 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ASPSCR1Q9BZE9 553 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 EDEM3Q9BZQ6 932 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 LRRC4Q9HBW1 653 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 AGPAT3Q9NRZ7 376 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ABCC13Q9NSE7 274 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 PANK4Q9NVE7 773 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 OCIAD1Q9NX40 245 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 XPO7Q9UIA9 1087 aaKnown RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 SLC25A13Q9UJS0 675 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 EMC9Q9Y3B6 208 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 TRPM6Q9BX84 2022 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 SPG11Q96JI7 2443 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ZNF106Q9H2Y7 1883 aaKnown RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 TNRC6AQ8NDV7 1962 aaKnown RBP5.38□□□□□ -1.55
PTPN4-210ENST00000485247 IGHV5-10-1A0A0J9YXX1 117 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 FRMD3A2A2Y4 597 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 LRRIQ3A6PVS8 624 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-210ENST00000485247 B2RBV5 119 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 PRSS44E7EML9 344 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
PTPN4-210ENST00000485247 B4GAT1O43505 415 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 KRT86O43790 486 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 KCNH1O95259 989 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 CBX6O95503 412 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 MT-CO1P00395 513 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 ASS1P00966 412 aaKnown RBP5.38□□□□□ -1.55
PTPN4-210ENST00000485247 ADRB3P13945 408 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 F8A1P23610 371 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 ALDH4A1P30038 563 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 CSTF2P33240 577 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPN4-210ENST00000485247 LIMS1P48059 325 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SEPHS1P49903 392 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 BLKP51451 505 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 NEK3P51956 506 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 PGDP52209 483 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 HK3P52790 923 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SLC8A3P57103 927 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 OR1D5P58170 312 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 NUCB2P80303 420 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 PRR5P85299 388 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 ADIGQ0VDE8 80 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SLC12A1Q13621 1099 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 TESK1Q15569 626 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 ALG11Q2TAA5 492 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 EDRF1Q3B7T1 1238 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 RAP1GAP2Q684P5 730 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 C6orf15Q6UXA7 325 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SPNS3Q6ZMD2 512 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 MACC1Q6ZN28 852 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 STXBP4Q6ZWJ1 553 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 VPS36Q86VN1 386 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 CHSY1Q86X52 802 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 TMEM151BQ8IW70 566 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SIX6OS1Q8N1H7 587 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SH2D3CQ8N5H7 860 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 BVESQ8NE79 360 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 TMIEQ8NEW7 156 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 OR2A12Q8NGT7 310 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 AZIN2Q96A70 460 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 CENPTQ96BT3 561 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 EPSTI1Q96J88 318 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 TRIM55Q9BYV6 548 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 UBXN6Q9BZV1 441 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SLAMF7Q9NQ25 335 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPN4-210ENST00000485247 POLHQ9Y253 713 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 FADS3Q9Y5Q0 445 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 CROCCQ5TZA2 2017 aa5.38□□□□□ -1.55
PTPN4-210ENST00000485247 CCDC168Q8NDH2 2452 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PCSK5Q92824 1860 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 A0A1W2PQJ5 194 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 HEATR9A2RTY3 570 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 ANKUB1A6NFN9 424 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 B4DGG1 531 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 B4E171 279 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 K7ERQ8 282 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 NEMP1O14524 444 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 EIF3DO15371 548 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 TBX1O43435 398 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 EXOC3O60645 756 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 KATNA1O75449 491 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 ENDOD1O94919 500 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PLA2G1BP04054 148 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 RPN1P04843 607 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 SNRPB2P08579 225 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 SRCP12931 536 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 LCP1P13796 627 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PAMP19021 973 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 TACR2P21452 398 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 IGFALSP35858 605 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 LONP1P36776 959 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 TSPAN7P41732 249 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 MC3RP41968 323 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PIK3CAP42336 1068 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 NEK4P51957 841 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PLK1P53350 603 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms