RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 TBL1YQ9BQ87 522 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 LRRC61Q9BV99 259 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 PAK5Q9P286 719 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 PGRMC1O00264 195 aaKnown RBP17.68■□□□□ 0.42
SREBF1-213ENST00000485080 SUN1O94901 812 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 TNFP01375 233 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 IFNB1P01574 187 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 CEACAM5P06731 702 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 IVLP07476 585 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 ALPPL2P10696 532 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 BPIP17213 487 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 GNG11P61952 73 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 SEMA5AQ13591 1074 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 ELOCQ15369 112 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 PROX2Q3B8N5 592 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 LINC00523Q86TU6 105 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 HID1Q8IV36 788 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 EID2Q8N6I1 236 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 CCDC89Q8N998 374 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 GPR26Q8NDV2 337 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 COG1Q8WTW3 980 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 TSACCQ96A04 125 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-213ENST00000485080 TCEAL2Q9H3H9 227 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-213ENST00000485080 FTSJ1Q9UET6 329 aa17.68■□□□□ 0.42
SREBF1-213ENST00000485080 PRSS38A1L453 326 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 TRIM38O00635 465 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 ADRB1P08588 477 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 SIM1P81133 766 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-213ENST00000485080 PDE1BQ01064 536 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 TAF1AQ15573 450 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-213ENST00000485080 PRRT3Q5FWE3 981 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 N4BP2L1Q5TBK1 243 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-213ENST00000485080 GLT6D1Q7Z4J2 308 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 RBFAQ8N0V3 343 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 BLOC1S5Q8TDH9 187 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 PDXPQ96GD0 296 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 MS4A14Q96JA4 679 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 CLPBQ9H078 707 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 ETNK1Q9HBU6 452 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 TRNAU1APQ9NX07 287 aaKnown RBP17.67■□□□□ 0.42
SREBF1-213ENST00000485080 TOR4AQ9NXH8 423 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 VPS18Q9P253 973 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 PCDHGA1Q9Y5H4 931 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 SCN8AQ9UQD0 1980 aa17.67■□□□□ 0.42
SREBF1-213ENST00000485080 TPRP12270 2363 aaKnown RBP17.66■□□□□ 0.42
SREBF1-213ENST00000485080 SPAARA0A1B0GVQ0 90 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 C2orf81A6NN90 581 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 FADS2P1A8MWK0 482 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 SIGLEC6O43699 453 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 TRIM16O95361 564 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 LDOC1O95751 146 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-213ENST00000485080 RPL22P35268 128 aaKnown RBP17.66■□□□□ 0.42
SREBF1-213ENST00000485080 KCTD16Q68DU8 428 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 PDCD7Q8N8D1 485 aaKnown RBP17.66■□□□□ 0.42
SREBF1-213ENST00000485080 GLIS1Q8NBF1 620 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 LMX1AQ8TE12 382 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 CNDP2Q96KP4 475 aaKnown RBP17.66■□□□□ 0.42
SREBF1-213ENST00000485080 VPS35Q96QK1 796 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 APOL2Q9BQE5 337 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 CAAP1Q9H8G2 361 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 IL26Q9NPH9 171 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 EIF2B3Q9NR50 452 aaKnown RBP17.66■□□□□ 0.42
SREBF1-213ENST00000485080 NCKIPSDQ9NZQ3 722 aa17.66■□□□□ 0.42
SREBF1-213ENST00000485080 BPTFQ12830 3046 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 GPR89AB7ZAQ6 455 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 YY2O15391 372 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 USP12O75317 370 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 CRTAMO95727 393 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 FUCA1P04066 466 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 GPR89BP0CG08 455 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 CDK4P11802 303 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 ETS1P14921 441 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 CKMT2P17540 419 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 LPOP22079 712 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-213ENST00000485080 PSMA3P25788 255 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 KCNJ1P48048 391 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 ILKQ13418 452 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 OLIG2Q13516 323 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 SPARCL1Q14515 664 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 HS1BP3Q53T59 392 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 ZCCHC8Q6NZY4 707 aaKnown RBP17.65■□□□□ 0.42
SREBF1-213ENST00000485080 GLYATL1Q969I3 302 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 MAGOHBQ96A72 148 aaKnown RBP17.65■□□□□ 0.42
SREBF1-213ENST00000485080 NAPGQ99747 312 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-213ENST00000485080 BOCQ9BWV1 1114 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 SPATA16Q9BXB7 569 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 RMI1Q9H9A7 625 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 CYP4F12Q9HCS2 524 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 MRPL40Q9NQ50 206 aaKnown RBP17.65■□□□□ 0.42
SREBF1-213ENST00000485080 RAB6BQ9NRW1 208 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 APOBEC2Q9Y235 224 aaKnown RBP17.65■□□□□ 0.42
SREBF1-213ENST00000485080 PKP3Q9Y446 797 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 CHD8Q9HCK8 2581 aa17.65■□□□□ 0.42
SREBF1-213ENST00000485080 ASXL3Q9C0F0 2248 aa17.64■□□□□ 0.42
SREBF1-213ENST00000485080 ARHGEF17Q96PE2 2063 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-213ENST00000485080 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-213ENST00000485080 STX7O15400 261 aaKnown RBP17.64■□□□□ 0.41
SREBF1-213ENST00000485080 FTH1P19P0C7X4 201 aa17.64■□□□□ 0.41
SREBF1-213ENST00000485080 CKMT1AP12532 417 aa17.64■□□□□ 0.41
SREBF1-213ENST00000485080 CTSEP14091 401 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms