RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SLC1A5Q15758 541 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 NFIL3Q16649 462 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 FAM53AQ6NSI3 398 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-207ENST00000484275 HAPLN4Q86UW8 402 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 SLC38A5Q8WUX1 472 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 ORAI1Q96D31 301 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 LINGO1Q96FE5 620 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 LRR1Q96L50 414 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 QRFPRQ96P65 431 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 INTS2Q9H0H0 1204 aaKnown RBP4.05□□□□□ -1.76
SCAF11-207ENST00000484275 UPF2Q9HAU5 1272 aaKnown RBP4.05□□□□□ -1.76
SCAF11-207ENST00000484275 ACSL5Q9ULC5 683 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 PCDHGB3Q9Y5G1 929 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 HHLA1C9JL84 531 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 NR5A2O00482 541 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 SEC14L5O43304 696 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 SYNGR3O43761 229 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 CD48P09326 243 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 FAM106CPP0CH98 169 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 PRSS56P0CW18 603 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 TERF1P54274 439 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 CSNK2A1P68400 391 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-207ENST00000484275 C10orf62Q5T681 223 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-207ENST00000484275 NRROSQ86YC3 692 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 CPOQ8IVL8 374 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 CSNK2A3Q8NEV1 391 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 ERVK-11Q9UQG0 969 aa4.04□□□□□ -1.76
SCAF11-207ENST00000484275 ZCWPW2A0A1B0GU75 182 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 EGFP01133 1207 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 GNB3P16520 340 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 POLR2CP19387 275 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-207ENST00000484275 TAS2R38P59533 333 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 LMO4P61968 165 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 TMEM35AQ53FP2 167 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 FRG2Q64ET8 278 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 TTI2Q6NXR4 508 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 PQLC2Q6ZP29 291 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 SLC46A3Q7Z3Q1 461 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 CCT6BQ92526 530 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 STAMBPL1Q96FJ0 436 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 ATOH8Q96SQ7 321 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 NEURL2Q9BR09 285 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 HCN3Q9P1Z3 774 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 SLC25A10Q9UBX3 287 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-207ENST00000484275 CEPT1Q9Y6K0 416 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 SCINQ9Y6U3 715 aa4.03□□□□□ -1.76
SCAF11-207ENST00000484275 A0A087X002 238 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 CCDC194A0A1B0GVG4 234 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 GAGE10A6NGK3 116 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 LDLRAD4O15165 306 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 CIDEAO60543 219 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 CTSVO60911 334 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 NBNO60934 754 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 PGM1P36871 562 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 LUMP51884 338 aaPredicted RBP4.02□□□□□ -1.77
SCAF11-207ENST00000484275 UFM1P61960 85 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 FOXM1Q08050 763 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 TRPT1Q86TN4 253 aaKnown RBP4.02□□□□□ -1.77
SCAF11-207ENST00000484275 NKAPQ8N5F7 415 aaKnown RBP4.02□□□□□ -1.77
SCAF11-207ENST00000484275 HERVK_113Q902F9 699 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 PPP1R13BQ96KQ4 1090 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 ASCL2Q99929 193 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 PYGO2Q9BRQ0 406 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 MAP3K20Q9NYL2 800 aaKnown RBP4.02□□□□□ -1.77
SCAF11-207ENST00000484275 POLG2Q9UHN1 485 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 CNOT7Q9UIV1 285 aaKnown RBP4.02□□□□□ -1.77
SCAF11-207ENST00000484275 A4GNTQ9UNA3 340 aa4.02□□□□□ -1.77
SCAF11-207ENST00000484275 TEX13CA0A0J9YWL9 993 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 C5orf60A6NFR6 353 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 VCYO14598 125 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 EIF3DO15371 548 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCAF11-207ENST00000484275 ZNF821O75541 412 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-207ENST00000484275 HOXC8P31273 242 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 FASLGP48023 281 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 ARCN1P48444 511 aaKnown RBP4.01□□□□□ -1.77
SCAF11-207ENST00000484275 AMPHP49418 695 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 CLK1P49759 484 aaKnown RBP4.01□□□□□ -1.77
SCAF11-207ENST00000484275 CLDN20P56880 219 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 IRX1P78414 480 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-207ENST00000484275 UBE3AQ05086 875 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 TECRLQ5HYJ1 363 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 ANO5Q75V66 913 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 GTSCR1Q86UQ5 136 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 ADSSL1Q8N142 457 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 ZBTB10Q96DT7 871 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 SENP5Q96HI0 755 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-207ENST00000484275 KLHL15Q96M94 604 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 MPHOSPH8Q99549 860 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 H2AFJQ9BTM1 129 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 KLHL20Q9Y2M5 609 aa4.01□□□□□ -1.77
SCAF11-207ENST00000484275 CACNA1FO60840 1977 aa4□□□□□ -1.77
SCAF11-207ENST00000484275 SPINT2O43291 252 aa4□□□□□ -1.77
SCAF11-207ENST00000484275 IGLV1-44P01699 117 aa4□□□□□ -1.77
SCAF11-207ENST00000484275 IRF1P10914 325 aa4□□□□□ -1.77
SCAF11-207ENST00000484275 ZNF26P17031 533 aaPredicted RBP4□□□□□ -1.77
SCAF11-207ENST00000484275 PSMC2P35998 433 aaKnown RBP4□□□□□ -1.77
SCAF11-207ENST00000484275 KHDRBS1Q07666 443 aaKnown RBP eCLIP4□□□□□ -1.77
SCAF11-207ENST00000484275 DECR1Q16698 335 aa4□□□□□ -1.77
SCAF11-207ENST00000484275 ALG11Q2TAA5 492 aa4□□□□□ -1.77
SCAF11-207ENST00000484275 COL28A1Q2UY09 1125 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms