RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 YPEL5P62699 121 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 DYNLT1P63172 113 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 EIF3IQ13347 325 aaKnown RBP9.99□□□□□ -0.81
CPSF4-213ENST00000484112 NOMO1Q15155 1222 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 ELOCQ15369 112 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 KIF26BQ2KJY2 2108 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 MANEAQ5SRI9 462 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 CCDC181Q5TID7 509 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 KAZNQ674X7 775 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 ENPP7Q6UWV6 458 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 MACC1Q6ZN28 852 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 ATG14Q6ZNE5 492 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 USP45Q70EL2 814 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 VASH2Q86V25 355 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 FSTL5Q8N475 847 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-213ENST00000484112 PAF1Q8N7H5 531 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 ARRDC2Q8TBH0 407 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 HTR3CQ8WXA8 447 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 PDLIM2Q96JY6 352 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 TEKT5Q96M29 485 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 TMEM74Q96NL1 305 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 QKIQ96PU8 341 aaKnown RBP eCLIP9.99□□□□□ -0.81
CPSF4-213ENST00000484112 MCCC1Q96RQ3 725 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-213ENST00000484112 TDRD1Q9BXT4 1180 aaKnown RBP9.99□□□□□ -0.81
CPSF4-213ENST00000484112 ADGRE3Q9BY15 652 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 FRMD8P1Q9BZ68 369 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-213ENST00000484112 SLC25A51Q9H1U9 297 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 CARD9Q9H257 536 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 LRRN3Q9H3W5 708 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 SEPT10Q9P0V9 454 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 TRIM10Q9UDY6 481 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 GUCA1BQ9UMX6 200 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 COQ6Q9Y2Z9 468 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 LOXL2Q9Y4K0 774 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 PCDHGC4Q9Y5F7 938 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 PCDHGA7Q9Y5G6 932 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 CAPN6Q9Y6Q1 641 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 COL27A1Q8IZC6 1860 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-213ENST00000484112 RP1P56715 2156 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 A0A1W2PQM1 296 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 D6RAR5 112 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 KCNK1O00180 336 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 DDX3YO15523 660 aaKnown RBP9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ZSCAN12O43309 604 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 STK10O94804 968 aaKnown RBP9.98□□□□□ -0.81
CPSF4-213ENST00000484112 RASGRP1O95267 797 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 MAP3K6O95382 1288 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 PTMAP06454 111 aaKnown RBP9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ALPIP09923 528 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ELFN1P0C7U0 828 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 LIPCP11150 499 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 PYGMP11217 842 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ZNF30P17039 623 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ITIH1P19827 911 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 MSNP26038 577 aaKnown RBP9.98□□□□□ -0.81
CPSF4-213ENST00000484112 LIG3P49916 1009 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 HK3P52790 923 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 MAPK10P53779 464 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 MAXP61244 160 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 CYP4F2P78329 520 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 TRAF2Q12933 501 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 IRF4Q15306 451 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 COLEC12Q5KU26 742 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 MEI1Q5TIA1 1274 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 NPNTQ6UXI9 565 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 NLRP8Q86W28 1048 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ZFAND4Q86XD8 727 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ZSWIM9Q86XI8 627 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 GKN2Q86XP6 184 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 CDKL3Q8IVW4 592 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-213ENST00000484112 CNTD1Q8N815 330 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ZSCAN1Q8NBB4 408 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 TP53I13Q8NBR0 393 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ATL2Q8NHH9 583 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 PIH1D2Q8WWB5 315 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 ALG3Q92685 438 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 TADA1Q96BN2 335 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 IMP4Q96G21 291 aaKnown RBP9.98□□□□□ -0.81
CPSF4-213ENST00000484112 TBATAQ96M53 351 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 LYSMD1Q96S90 227 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 STARD5Q9NSY2 213 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 PPP2R2CQ9Y2T4 447 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 PCDHB11Q9Y5F2 797 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 MGAQ8IWI9 3026 aa9.98□□□□□ -0.81
CPSF4-213ENST00000484112 PRAMEF33A0A0G2JMD5 474 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 A0A0J9YYE9 177 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 RGSL1A5PLK6 1076 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 TERTO14746 1132 aaKnown RBP9.97□□□□□ -0.81
CPSF4-213ENST00000484112 PRAMEF10O60809 474 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 FTCDO95954 541 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 EPOP01588 193 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 TRBC1P01850 177 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 ITGB2P05107 769 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 PYGLP06737 847 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 HOXC4P09017 264 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-213ENST00000484112 PECAM1P16284 738 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-213ENST00000484112 ITGB6P18564 788 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 PTPN3P26045 913 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 HTR1BP28222 390 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms