RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PLEKHA4Q9H4M7 779 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 NOL11Q9H8H0 719 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 TUFT1Q9NNX1 390 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 DNAJC17Q9NVM6 304 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 INTS13Q9NVM9 706 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 TMEM248Q9NWD8 314 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 ITGA11Q9UKX5 1188 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SNX7Q9UNH6 387 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 WBP11Q9Y2W2 641 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 TDRKHQ9Y2W6 561 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SALL3Q9BXA9 1300 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 CCDC169A6NNP5 214 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 MAGEB17A8MXT2 336 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 NPIPB11E5RHQ5 1161 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 O00370 1275 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 CES2O00748 559 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 CLIC2O15247 247 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 EIF3DO15371 548 aaKnown RBP eCLIP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 OGG1O15527 345 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 RIPK2O43353 540 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 TSC22D2O75157 780 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 CELF2O95319 508 aaKnown RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 IFNB1P01574 187 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 LINGO3P0C6S8 592 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 FAM58BPP0C7Q3 252 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 SFTPCP11686 197 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 PFKFB1P16118 471 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 IL7RP16871 459 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 ADRA2CP18825 462 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 MYF6P23409 242 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 EEF1B2P24534 225 aaKnown RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 TYK2P29597 1187 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 CDC25CP30307 473 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 PTGER1P34995 402 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 RABIFP47224 123 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 ARFIP1P53367 373 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 RAE1P78406 368 aaKnown RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 GRSF1Q12849 480 aaKnown RBP eCLIP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 TRA2AQ13595 282 aaKnown RBP eCLIP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 RPE65Q16518 533 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 TAZQ16635 292 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 COL28A1Q2UY09 1125 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 TMEM268Q5VZI3 342 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 SP5Q6BEB4 398 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 IRGCQ6NXR0 463 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 RBM43Q6ZSC3 357 aaKnown RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 ABI3BPQ7Z7G0 1075 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 PRIMA1Q86XR5 153 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 SYT12Q8IV01 421 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 MAPKAPK5Q8IW41 473 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 ADGRF3Q8IZF5 1079 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 SFRP1Q8N474 314 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 C12orf76Q8N812 135 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 C9orf43Q8TAL5 461 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 KIAA1524Q8TCG1 905 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 XAGE5Q8WWM1 108 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 R3HDM4Q96D70 268 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 PABPC5Q96DU9 382 aaKnown RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 FBXL20Q96IG2 436 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 HARBI1Q96MB7 349 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 NUDCD1Q96RS6 583 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 TCHPQ9BT92 498 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 CACNG6Q9BXT2 260 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 RTN4RQ9BZR6 473 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 NUAK2Q9H093 628 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 FANCFQ9NPI8 374 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 SLC35D1Q9NTN3 355 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 HEY2Q9UBP5 337 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 LAMP5Q9UJQ1 280 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 FBXW11Q9UKB1 542 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 FBXW2Q9UKT8 454 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 SH2B3Q9UQQ2 575 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 DTX4Q9Y2E6 619 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 CARD8Q9Y2G2 431 aa4.49□□□□□ -1.69
PTCD3-214ENST00000483925 R3HDM2Q9Y2K5 976 aaKnown RBP4.49□□□□□ -1.69
PTCD3-214ENST00000483925 A0A1W2PR77 199 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 SMIM30A4D0T7 59 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 TMEM110-MUSTN1A8MSY1 372 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 GPR89AB7ZAQ6 455 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 UBXN8O00124 270 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 RASGRF2O14827 1237 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 PLRG1O43660 514 aaKnown RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 SLC25A17O43808 307 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 MOSPD3O75425 235 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 KLKB1P03952 638 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 GPR89BP0CG08 455 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 PCNAP12004 261 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 FCGR2AP12318 317 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ITIH1P19827 911 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ANXA7P20073 488 aaKnown RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ASMTP46597 345 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 IFNAR2P48551 515 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 CLCN3P51790 818 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ARSFP54793 590 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ECT2LQ008S8 904 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 OCA2Q04671 838 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 GAMTQ14353 236 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 CNGA3Q16281 694 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 USP41Q3LFD5 358 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms