RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 KIAA0754O94854 1291 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 DDAH2O95865 285 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 KRT3P12035 628 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 TEAD1P28347 426 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 NOP2P46087 812 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 NDST2P52849 883 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 GFERP55789 205 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 SH3BP2P78314 561 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 FMO1Q01740 532 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 NSUN2Q08J23 767 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 CHAF1BQ13112 559 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 SEMA5AQ13591 1074 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 INPP5JQ15735 1006 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 MIIPQ5JXC2 388 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 KLHDC7AQ5VTJ3 777 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 CPZQ66K79 652 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 APLFQ8IW19 511 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 ARHGAP12Q8IWW6 846 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 SRRM1Q8IYB3 904 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 PRR7Q8TB68 274 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 PDCD6IPQ8WUM4 868 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 ELMO2Q96JJ3 720 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 SMIM14Q96QK8 99 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 RUFY1Q96T51 708 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 AGAP2Q99490 1192 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 SARS2Q9NP81 518 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 TBC1D29Q9UFV1 150 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 ERRFI1Q9UJM3 462 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 A6NCN8 305 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 WIPF3A6NGB9 483 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 ARHGAP42A6NI28 874 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 HTRA2O43464 458 aaPredicted RBP10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 CPP00450 1065 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 ANKRD34CP0C6C1 535 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 UCHL3P15374 230 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 GPR1P46091 355 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 PGDP52209 483 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 TPI1P60174 286 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 AP1S1P61966 158 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 DPTQ07507 201 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 SLC10A7Q0GE19 358 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 TRAF2Q12933 501 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 DNASE1L3Q13609 305 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 MAN2A1Q16706 1144 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 CA9Q16790 459 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 C1QL3Q5VWW1 255 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 IYDQ6PHW0 289 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 ADAMTSL4Q6UY14 1074 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 TECPR1Q7Z6L1 1165 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 GALNT13Q8IUC8 556 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 TP53INP2Q8IXH6 220 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 NPWQ8N729 165 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 Q8NA96 180 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 CT55Q8WUE5 264 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 SCAMP4Q969E2 229 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 STAMBPL1Q96FJ0 436 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 PSKH2Q96QS6 385 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 OR6C1Q96RD1 312 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 PCDHB18PQ96TA0 734 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 ABCG8Q9H221 673 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 NDST4Q9H3R1 872 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 SP110Q9HB58 689 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 OGFRQ9NZT2 677 aa10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 MN1Q10571 1320 aaPredicted RBP10.78□□□□□ -0.68
SMARCC1-205ENST00000483847 SETD2Q9BYW2 2564 aaPredicted RBP10.77□□□□□ -0.68
SMARCC1-205ENST00000483847 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 DFFAO00273 331 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 INPP4BO15327 924 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 GFPT2O94808 682 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 NDUFA10O95299 355 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 LDLRP01130 860 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 CTPS1P17812 591 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 CASP14P31944 242 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 SEPHS1P49903 392 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 ZNF143P52747 638 aaPredicted RBP10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 EPHA4P54764 986 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 RPS18P62269 152 aaKnown RBP10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 RPL7AP62424 266 aaKnown RBP10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 CDR2Q01850 454 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 IL10RBQ08334 325 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 LRP8Q14114 963 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 VWA3BQ502W6 1294 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 HSP90AA4PQ58FG1 418 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 CHST15Q7LFX5 561 aaPredicted RBP10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 LYSMD3Q7Z3D4 306 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 RASGRP3Q8IV61 690 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 PGBD5Q8N414 524 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 AP2M1Q96CW1 435 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 C9orf72Q96LT7 481 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 SLC25A23Q9BV35 468 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 SELENOOQ9BVL4 669 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 STK33Q9BYT3 514 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 ACTL8Q9H568 366 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 ZNF768Q9H5H4 540 aaKnown RBP10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 AKIRIN1Q9H9L7 192 aaPredicted RBP10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 NOD2Q9HC29 1040 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 MLXIPLQ9NP71 852 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 KCTD5Q9NXV2 234 aa10.77□□□□□ -0.69
SMARCC1-205ENST00000483847 KIAA1468Q9P260 1216 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms