RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SLC28A2O43868 658 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 RAMP2O60895 175 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 LSM8O95777 96 aaKnown RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 GSRP00390 522 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 UGT2B4P06133 528 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ITGA2BP08514 1039 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ALPIP09923 528 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CTSEP14091 401 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CYP11B1P15538 503 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 XPAP23025 273 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 HTR1BP28222 390 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CDH5P33151 784 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 FLT3P36888 993 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ECI1P42126 302 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 GATA4P43694 442 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 NOP2P46087 812 aaKnown RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ADKP55263 362 aaKnown RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 PPARDQ03181 441 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 C1orf61Q13536 156 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ELOCQ15369 112 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 MAN2A1Q16706 1144 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CLEC16AQ2KHT3 1053 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 DPY19L1Q2PZI1 675 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ZSCAN23Q3MJ62 389 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CRTC3Q6UUV7 619 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 MACC1Q6ZN28 852 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ARCQ7LC44 396 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 FGD2Q7Z6J4 655 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CLEC14AQ86T13 490 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 TTC7BQ86TV6 843 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 VPS36Q86VN1 386 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF354CQ86Y25 554 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 XYLT1Q86Y38 959 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 JAMLQ86YT9 394 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 SLC35F3Q8IY50 421 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 FAM71AQ8IYT1 594 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 RBFAQ8N0V3 343 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 FSTL5Q8N475 847 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 OR2AP1Q8NGE2 309 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 OR6K2Q8NGY2 324 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ATL2Q8NHH9 583 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CXorf40AQ8TE69 158 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ARHGEF2Q92974 986 aaKnown RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 MED8Q96G25 268 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 TCTN2Q96GX1 697 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CFAP57Q96MR6 1250 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 KLHL32Q96NJ5 620 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CCNL2Q96S94 520 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CCDC3Q9BQI4 270 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 LRRC61Q9BV99 259 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 BOCQ9BWV1 1114 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 SEMA4CQ9C0C4 833 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 STRADBQ9C0K7 418 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 MAGEH1Q9H213 219 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 TRIT1Q9H3H1 467 aaKnown RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CLMPQ9H6B4 373 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 SIX2Q9NPC8 291 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 GPATCH2Q9NW75 528 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 GULP1Q9UBP9 304 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF212Q9UDV6 495 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 OR12D3Q9UGF7 316 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 RNF112Q9ULX5 631 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 PADI4Q9UM07 663 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ITM2BQ9Y287 266 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 NPFFR2Q9Y5X5 522 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 TEP1Q99973 2627 aaKnown RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 HECTD1Q9ULT8 2610 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 A0A1W2PNU3 283 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TMEM110-MUSTN1A8MSY1 372 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 PES1O00541 588 aaKnown RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 NTN3O00634 580 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 AREL1O15033 823 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 YY2O15391 372 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 BUB1O43683 1085 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 GCATO75600 419 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 RASGRP1O95267 797 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 CD160O95971 181 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 IGSF6O95976 241 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 F13BP05160 661 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 THBDP07204 575 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 PNMA6AP0CW24 399 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TSHRP16473 764 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 SDC4P31431 198 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 GKP32189 559 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 IGFALSP35858 605 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 ACVRL1P37023 503 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 PEX5P50542 639 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 SUOXP51687 545 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 INHBCP55103 352 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 ELP6Q0PNE2 266 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 DRAP1Q14919 205 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 CDO1Q16878 200 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 NKPD1Q17RQ9 610 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 KLHL40Q2TBA0 621 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 MYLK3Q32MK0 819 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TPRG1LQ5T0D9 272 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TAF3Q5VWG9 929 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 KIAA1614Q5VZ46 1190 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 NAA35Q5VZE5 725 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms