RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 PPM1MQ96MI6 270 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 TSGA13Q96PP4 275 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 IL12RB2Q99665 862 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 RNF208Q9H0X6 261 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 C1orf21Q9H246 121 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 TLE6Q9H808 572 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 AKTIPQ9H8T0 292 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 OSER1Q9NX31 292 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 C6orf203Q9P0P8 240 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 GALPQ9UBC7 116 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 MTF2Q9Y483 593 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 MYO1GB0I1T2 1018 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 PPP6CO00743 305 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 HSPA1AP0DMV8 641 aaKnown RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 HSPA1BP0DMV9 641 aaKnown RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 PKMP14618 531 aaKnown RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 MAGEA10P43363 369 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 EPHB3P54753 998 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 CDKN2DP55273 166 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 RETSATQ6NUM9 610 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 FAM171BQ6P995 826 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 AFTPHQ6ULP2 937 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 RANBP10Q6VN20 620 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 SAPCD2Q86UD0 394 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 ELMOD1Q8N336 334 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 MPP4Q96JB8 637 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 RTP3Q9BQQ7 232 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 DCUN1D5Q9BTE7 237 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 TNKS2Q9H2K2 1166 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 CIDEBQ9UHD4 219 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 EIF2B4Q9UI10 523 aaKnown RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 SCML2Q9UQR0 700 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 SLC38A8A6NNN8 435 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 INSIG1O15503 277 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 SEC22BO75396 215 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 OR4F21O95013 312 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 ALDH1A1P00352 501 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 LRG1P02750 347 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 CNPP09543 421 aaKnown RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 FAM163BP0C2L3 166 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 ZNF7P17097 686 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 SLC11A1P49279 550 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 GTF2H3Q13889 308 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 CEACAM7Q14002 265 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 CPSF6Q16630 551 aaKnown RBP eCLIP9.12□□□□□ -0.95
CALD1-220ENST00000482470 GSTA3Q16772 222 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 USP41Q3LFD5 358 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 ARL14EPQ8N8R7 260 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 FUBP3Q96I24 572 aaKnown RBP eCLIP9.12□□□□□ -0.95
CALD1-220ENST00000482470 DEFB118Q96PH6 123 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 NR1H4Q96RI1 486 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 PKP2Q99959 881 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.12□□□□□ -0.95
CALD1-220ENST00000482470 ZBTB26Q9HCK0 441 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 MRGBPQ9NV56 204 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 RNF186Q9NXI6 227 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 PKD2L2Q9NZM6 624 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 DOCK1Q14185 1865 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 MTMR11A4FU01 709 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 SDHDO14521 159 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 GRID2O43424 1007 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 NPHS1O60500 1241 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 EOMESO95936 686 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 ALPIP09923 528 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 PBLDP30039 288 aaPredicted RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 CREB5Q02930 508 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 SULT2A1Q06520 285 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 TRIM25Q14258 630 aaKnown RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 PGS1Q32NB8 556 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 C1QTNF12Q5T7M4 302 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 DDX53Q86TM3 631 aaKnown RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 DOCK3Q8IZD9 2030 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 CLDN19Q8N6F1 224 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 FBXO30Q8TB52 745 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 GRIN3AQ8TCU5 1115 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 SLC45A3Q96JT2 553 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 YME1L1Q96TA2 773 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 YIPF2Q9BWQ6 316 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 ORC6Q9Y5N6 252 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 HOXA2O43364 376 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 RNASEH1O60930 286 aaKnown RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 TNFAIP8O95379 198 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 LINGO3P0C6S8 592 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 SELPP16109 830 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 GJA1P17302 382 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 UGT1A6P19224 532 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 UGT1A1P22309 533 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 UGT1A4P22310 534 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 GKP32189 559 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 UGT1A3P35503 534 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 UGT1A5P35504 534 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 NNMTP40261 264 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 TTPAP49638 278 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 MTTPP55157 894 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 HSF5Q4G112 596 aaPredicted RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 RAB41Q5JT25 222 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 RBM44Q6ZP01 1051 aaKnown RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 GPRIN3Q6ZVF9 776 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 ARHGAP22Q7Z5H3 698 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms