RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZNF792Q3KQV3 632 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 C6orf163Q5TEZ5 329 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 CST9LP1Q5W188 147 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 TMEM154Q6P9G4 183 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 PAQR3Q6TCH7 311 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 C15orf39Q6ZRI6 1047 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 MOB3CQ70IA8 216 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 ERN2Q76MJ5 926 aaKnown RBP3.36□□□□□ -1.87
SMC6-208ENST00000481708 CABP7Q86V35 215 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 PSD4Q8NDX1 1056 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 MYLIPQ8WY64 445 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 SCAMP4Q969E2 229 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 TMEM176AQ96HP8 235 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 B3GNT4Q9C0J1 378 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 GDE1Q9NZC3 331 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 AIPL1Q9NZN9 384 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 CHRNA9Q9UGM1 479 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 NUDCQ9Y266 331 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 FRMPD4Q14CM0 1322 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 DOCK3Q8IZD9 2030 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 TEX13CA0A0J9YWL9 993 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 SEPT4O43236 478 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 CIAO1O76071 339 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 C1RP00736 705 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 OPN1MWP04001 364 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 OR52Z1P0C646 297 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 OPN1MW2P0DN77 364 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 OPN1MW3P0DN78 364 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 DRD1P21728 446 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 GDI1P31150 447 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 PGDP52209 483 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 IKQ13123 557 aaPredicted RBP3.36□□□□□ -1.87
SMC6-208ENST00000481708 CSHL1Q14406 222 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 FGFBP1Q14512 234 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 SLC18A3Q16572 532 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 ZXDCQ2QGD7 858 aaPredicted RBP3.36□□□□□ -1.87
SMC6-208ENST00000481708 KLHL26Q53HC5 615 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 PM20D1Q6GTS8 502 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 CLEC9AQ6UXN8 241 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 HOOK3Q86VS8 718 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 SYT12Q8IV01 421 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 ANKRD44Q8N8A2 993 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 OR52K2Q8NGK3 314 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 SLC25A28Q96A46 364 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 PIMREGQ9BSJ6 248 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 PLK3Q9H4B4 646 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 RPAP3Q9H6T3 665 aaPredicted RBP3.36□□□□□ -1.87
SMC6-208ENST00000481708 CNOT10Q9H9A5 744 aaKnown RBP3.36□□□□□ -1.87
SMC6-208ENST00000481708 SYTL2Q9HCH5 934 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 TM9SF3Q9HD45 589 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 HPS4Q9NQG7 708 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 HMG20BQ9P0W2 317 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 EXTL2Q9UBQ6 330 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 SUN2Q9UH99 717 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 ANGEL1Q9UNK9 670 aaKnown RBP3.36□□□□□ -1.87
SMC6-208ENST00000481708 SLC12A4Q9UP95 1085 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 NAALAD2Q9Y3Q0 740 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 N6AMT1Q9Y5N5 214 aa3.36□□□□□ -1.87
SMC6-208ENST00000481708 GOLGA6L10A0A0M3HER8 536 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ECE2O60344 883 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 HNRNPCL1O60812 293 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 HAUS5O94927 633 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 C8BP07358 591 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 GALTP07902 379 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 LBPP18428 481 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 CCR1P32246 355 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PRR5P85299 388 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ECT2LQ008S8 904 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ZKSCAN8Q15776 578 aaPredicted RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 FBLN7Q53RD9 439 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 COLEC12Q5KU26 742 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 KRT80Q6KB66 452 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 RNF168Q8IYW5 571 aaPredicted RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 SIRT6Q8N6T7 355 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SETD9Q8NE22 299 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ABHD5Q8WTS1 349 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ALG3Q92685 438 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 FBXL20Q96IG2 436 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PRMT7Q9NVM4 692 aaPredicted RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 NCKIPSDQ9NZQ3 722 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PTGFRNQ9P2B2 879 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 YBX2Q9Y2T7 364 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 COPG1Q9Y678 874 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 FANCIQ9NVI1 1328 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PRPF4O43172 522 aaKnown RBP eCLIP3.35□□□□□ -1.87
SMC6-208ENST00000481708 LANCL1O43813 399 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ENO2P09104 434 aaPredicted RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 C1QTNF9P0C862 333 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ZCCHC18P0CG32 403 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 TOP1P11387 765 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 SKILP12757 684 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PDGFRAP16234 1089 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 CDH2P19022 906 aaPredicted RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 CASTP20810 708 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 RBL1P28749 1068 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 NIPAL4Q0D2K0 466 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 RALGDSQ12967 914 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PPIGQ13427 754 aaKnown RBP eCLIP3.35□□□□□ -1.87
SMC6-208ENST00000481708 RIN1Q13671 783 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PLEKHN1Q494U1 663 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms