RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ZNF580Q9UK33 172 aa3.85□□□□□ -1.79
CBX3-207ENST00000481300 C1orf226A1L170 272 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 FAM90A8PA6NJQ4 464 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 H3BQ06 376 aaPredicted RBP3.84□□□□□ -1.79
CBX3-207ENST00000481300 GPC4O75487 556 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 FTCDO95954 541 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 LDHCP07864 332 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 SRPRAP08240 638 aaKnown RBP3.84□□□□□ -1.79
CBX3-207ENST00000481300 FAM90A13PP0C7W8 464 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 FAM90A24PP0C7X0 464 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 ACTN1P12814 892 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 RRM1P23921 792 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 HOXC9P31274 260 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 CDKN2AP42771 156 aaKnown RBP3.84□□□□□ -1.79
CBX3-207ENST00000481300 CAMPP49913 170 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 SNX16P57768 344 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 EGR4Q05215 589 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 EFNB3Q15768 340 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 CTF1Q16619 201 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 AMZ1Q400G9 498 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 KCTD18Q6PI47 426 aaPredicted RBP3.84□□□□□ -1.79
CBX3-207ENST00000481300 SZRD1Q7Z422 152 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 HACE1Q8IYU2 909 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 TMTC2Q8N394 836 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 MIB2Q96AX9 1013 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 NSUN4Q96CB9 384 aaKnown RBP3.84□□□□□ -1.79
CBX3-207ENST00000481300 ELMOD3Q96FG2 381 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 CALML4Q96GE6 196 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 OR1F2PQ96R84 312 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 SEPT5Q99719 369 aaPredicted RBP3.84□□□□□ -1.79
CBX3-207ENST00000481300 TMEM204Q9BSN7 226 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 ACSS1Q9NUB1 689 aaPredicted RBP3.84□□□□□ -1.79
CBX3-207ENST00000481300 TERF2IPQ9NYB0 399 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 OGFRQ9NZT2 677 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 WNT16Q9UBV4 365 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 SLC9A2Q9UBY0 812 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 TMEM5Q9Y2B1 443 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 SNX9Q9Y5X1 595 aa3.84□□□□□ -1.79
CBX3-207ENST00000481300 LRRC9Q6ZRR7 1453 aa3.84□□□□□ -1.8
CBX3-207ENST00000481300 MAP3K1Q13233 1512 aa3.84□□□□□ -1.8
CBX3-207ENST00000481300 CLASP1Q7Z460 1538 aa3.84□□□□□ -1.8
CBX3-207ENST00000481300 SAMD9Q5K651 1589 aa3.84□□□□□ -1.8
CBX3-207ENST00000481300 A0A0U1RQJ8 604 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 hCG_1807616A0A1W2PRN6 198 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 NDUFS7O75251 213 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 DAB1O75553 588 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GAGE7O76087 117 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 OR2C1O95371 312 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 EGFP01133 1207 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GAGE12FP0CL80 117 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GAGE12GP0CL81 117 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GAGE12IP0CL82 117 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 CSH1P0DML2 217 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 CSH2P0DML3 217 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 UBA1P22314 1058 aaKnown RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 TKTP29401 623 aaKnown RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 BDKRB2P30411 391 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GCH1P30793 250 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 UBA7P41226 1012 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GARSP41250 739 aaKnown RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 COMPP49747 757 aaPredicted RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 PEX5P50542 639 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 TAS2R40P59535 323 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 CSNK2A1P68400 391 aaPredicted RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 MRPS34P82930 218 aaKnown RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 FOXM1Q08050 763 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 DDR1Q08345 913 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GRIK2Q13002 908 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GAGE1Q13065 139 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 GAGE4Q13068 117 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 IKQ13123 557 aaPredicted RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 ACVR2BQ13705 512 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 PNLIPRP3Q17RR3 467 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 ASTE1Q2TB18 679 aaPredicted RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 PCGF3Q3KNV8 242 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 DUSP28Q4G0W2 176 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 ATP13A5Q4VNC0 1218 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 XKR9Q5GH70 373 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 JADE1Q6IE81 842 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 DLK2Q6UY11 383 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 KRBA2Q6ZNG9 492 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 BRINP3Q76B58 766 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 IQCF1Q8N6M8 205 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 CSNK2A3Q8NEV1 391 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 ELP5Q8TE02 316 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 JAKMIP2Q96AA8 810 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 SAT2Q96F10 170 aaPredicted RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 CCDC34Q96HJ3 373 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 NUDCD1Q96RS6 583 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 PLK3Q9H4B4 646 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 FBXL17Q9UF56 701 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 FBXW11Q9UKB1 542 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 ATP10BO94823 1461 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 NUP153P49790 1475 aaKnown RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 CCDC18Q5T9S5 1454 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 EPRSP07814 1512 aaKnown RBP3.83□□□□□ -1.8
CBX3-207ENST00000481300 KIAA0556O60303 1618 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 TTC3P53804 2025 aa3.83□□□□□ -1.8
CBX3-207ENST00000481300 CCNB3Q8WWL7 1395 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 AGAP14A8MT82 685 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms