RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ZNF284Q2VY69 593 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 TMEM52BQ4KMG9 183 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 CRTC1Q6UUV9 634 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 KDM7AQ6ZMT4 941 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 IQCHQ86VS3 1027 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 TRIM69Q86WT6 500 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 TMEM145Q8NBT3 493 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 SPATA4Q8NEY3 305 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 BLOC1S5Q8TDH9 187 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 GRK7Q8WTQ7 553 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 SLC39A7Q92504 469 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 SCRN2Q96FV2 425 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 TBL1YQ9BQ87 522 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 TRIM51Q9BSJ1 452 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 SLC17A9Q9BYT1 436 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 KDM4CQ9H3R0 1056 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 GOLGA6AQ9NYA3 693 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 SHOC2Q9UQ13 582 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 PCDHB1Q9Y5F3 818 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 SPO11Q9Y5K1 396 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 AK5Q9Y6K8 562 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 U3KQA8 63 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 BSNQ9UPA5 3926 aa9.05□□□□□ -0.96
VCP-206ENST00000480327 PIEZO2Q9H5I5 2752 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 C1orf232A0A0U1RR37 186 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 A0A1W2PNU3 283 aaPredicted RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 CAPN8A6NHC0 703 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 ESPNB1AK53 854 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 CCDC188H7C350 402 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 RAD51BO15315 384 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 TTI1O43156 1089 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 BUD23O43709 281 aaKnown RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 TM7SF2O76062 418 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 HEXIM1O94992 359 aaKnown RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 AP2A1O95782 977 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 APRTP07741 180 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 CDK4P11802 303 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 TPH1P17752 444 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 NFKBIAP25963 317 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 ADRA1AP35348 466 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 GRIA1P42261 906 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 CLDN2P57739 230 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 RPL26P61254 145 aaKnown RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 DR1Q01658 176 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 TLE3Q04726 772 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 CKAP4Q07065 602 aaKnown RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 ILKQ13418 452 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 TMEM259Q4ZIN3 620 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 SETMARQ53H47 684 aaPredicted RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 DNTTIP2Q5QJE6 756 aaKnown RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 CDCP2Q5VXM1 449 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 LRRC66Q68CR7 880 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 KCTD11Q693B1 232 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 KIAA1161Q6NSJ0 714 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 NEK5Q6P3R8 708 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 LIPIQ6XZB0 460 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 PPP1R21Q6ZMI0 780 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 RFLNAQ6ZTI6 216 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 LYSMD3Q7Z3D4 306 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 HSD11B1LQ7Z5J1 315 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 SLC22A18ASQ8N1D0 253 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 CACTIN-AS1Q8N1I8 211 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 ZNF843Q8N446 348 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 OR52K1Q8NGK4 314 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 SKA1Q96BD8 255 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 FCRL3Q96P31 734 aaPredicted RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 PPP1R2P1Q96PQ5 205 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 MCCC1Q96RQ3 725 aaPredicted RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 C1QTNF2Q9BXJ5 285 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 GPR63Q9BZJ6 419 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 TRIM31Q9BZY9 425 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 LRRC40Q9H9A6 602 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 ASIC3Q9UHC3 531 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 PCYOX1Q9UHG3 505 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 FEZ2Q9UHY8 353 aaPredicted RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 CD84Q9UIB8 345 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 RPL26L1Q9UNX3 145 aaKnown RBP9.04□□□□□ -0.96
VCP-206ENST00000480327 CLCA2Q9UQC9 943 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 DMTF1Q9Y222 760 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 PPIL1Q9Y3C6 166 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 NEU2Q9Y3R4 380 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 MRFAP1Q9Y605 127 aa9.04□□□□□ -0.96
VCP-206ENST00000480327 TCRBV7S3A2A0A539 114 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 TK2O00142 265 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 AURKAO14965 403 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 CASC3O15234 703 aaKnown RBP9.03□□□□□ -0.96
VCP-206ENST00000480327 PSMD3O43242 534 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 RECQL5O94762 991 aaPredicted RBP9.03□□□□□ -0.96
VCP-206ENST00000480327 MT-CO3P00414 261 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 EPOP01588 193 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 PCCBP05166 539 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 FGF1P05230 155 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 HLA-DPA1P20036 260 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 DGKAP23743 735 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 ADCY8P40145 1251 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 ETV3P41162 512 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 PTSQ03393 145 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 MTM1Q13496 603 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 SEMA5AQ13591 1074 aa9.03□□□□□ -0.96
VCP-206ENST00000480327 WHAMMP3Q1A5X7 153 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms