RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 AQP12BA6NM10 295 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 SULT1C4O75897 302 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 NR4A1P22736 598 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 CAPGP40121 348 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 GPR15P49685 360 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 ACADVLP49748 655 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 AIF1P55008 147 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 ITGADQ13349 1161 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 EIF4EBP2Q13542 120 aaPredicted RBP13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 INPP5AQ14642 412 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 MOGQ16653 247 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 ZIK1Q3SY52 487 aaPredicted RBP13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 EGFLAMQ63HQ2 1017 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 PIM3Q86V86 326 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 AQP12AQ8IXF9 295 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 DHRSXQ8N5I4 330 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 DNAJB14Q8TBM8 379 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 CHPT1Q8WUD6 406 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 ROPN1LQ96C74 230 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 PKMYT1Q99640 499 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 PIF1Q9H611 641 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 FANCEQ9HB96 536 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 RBM22Q9NW64 420 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 SMPD3Q9NY59 655 aaPredicted RBP13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 IFT80Q9P2H3 777 aaPredicted RBP13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 PADI3Q9ULW8 664 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 TRPV2Q9Y5S1 764 aa13.28□□□□□ -0.28
PDZRN3-208ENST00000479530 A0A1B0GTL3 188 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 SOBPA7XYQ1 873 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 H0Y858 1186 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 SIX3O95343 332 aaPredicted RBP13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 IGLV3-25P01717 112 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 ALDH2P05091 517 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 GFAPP14136 432 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 STX1BP61266 288 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 INTS6LQ5JSJ4 861 aaKnown RBP13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 IRAK1BP1Q5VVH5 260 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 CST9Q5W186 159 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 LCN8Q6JVE9 175 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 ATPAF2Q8N5M1 289 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 PCYOX1LQ8NBM8 494 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 GPR152Q8TDT2 470 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 KLHL5Q96PQ7 755 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 LTB4R2Q9NPC1 389 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 TLR9Q9NR96 1032 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 TREX1Q9NSU2 369 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 RAD54BQ9Y620 910 aa13.27□□□□□ -0.28
PDZRN3-208ENST00000479530 H3BMM5 538 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 MTSS1O43312 755 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 CACNG3O60359 315 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 KPNA6O60684 536 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 DNAJB1P25685 340 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 MAP4P27816 1152 aaKnown RBP13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 PCSK1P29120 753 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 RPS9P46781 194 aaKnown RBP13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 POU4F1Q01851 419 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 TRIM32Q13049 653 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 GPR158Q5T848 1215 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 NEPROQ6NW34 567 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 TFAP2DQ7Z6R9 452 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 LINC00523Q86TU6 105 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 TRPV3Q8NET8 790 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 PPHLN1Q8NEY8 458 aaKnown RBP13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 OR13F1Q8NGS4 319 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 VPS33AQ96AX1 596 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 FEM1CQ96JP0 617 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 MRGPRX2Q96LB1 330 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 MUS81Q96NY9 551 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 TSPAN18Q96SJ8 248 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 SLAMF8Q9P0V8 285 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 ACTR3BQ9P1U1 418 aa13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 MAGED1Q9Y5V3 778 aaPredicted RBP13.27□□□□□ -0.29
PDZRN3-208ENST00000479530 IRAK2O43187 625 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TPD52L2O43399 206 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 LTA4HP09960 611 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 CCNA2P20248 432 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 EEF1B2P24534 225 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 RFC2P35250 354 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 ADRA1AP35348 466 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 FUT11Q495W5 492 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 UNC50Q53HI1 259 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 FBXO48Q5FWF7 155 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 ZNF678Q5SXM1 525 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 OTUD3Q5T2D3 398 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 SNX29P2Q8IUI4 249 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 AFAP1L2Q8N4X5 818 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 SNX19Q92543 992 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 LRRC58Q96CX6 371 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TEX37Q96LM6 180 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 NSUN5Q96P11 429 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 VAT1Q99536 393 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 SEPHS2Q99611 448 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 NOL6Q9H6R4 1146 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 J3KR12 359 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 PIP5K1BO14986 540 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 ANGPT2O15123 496 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 SNAP91O60641 907 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 HSD17B1P14061 328 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms