RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 GRM3Q14832 879 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 VARS2Q5ST30 1063 aaKnown RBP21.18■□□□□ 0.98
SDF4-206ENST00000478938 HEATR6Q6AI08 1181 aaKnown RBP21.18■□□□□ 0.98
SDF4-206ENST00000478938 ZBTB33Q86T24 672 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 SPNS2Q8IVW8 549 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 SLC39A13Q96H72 371 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 PIWIL1Q96J94 861 aaKnown RBP21.18■□□□□ 0.98
SDF4-206ENST00000478938 FAM49AQ9H0Q0 323 aaPredicted RBP21.18■□□□□ 0.98
SDF4-206ENST00000478938 INTS6Q9UL03 887 aaKnown RBP21.18■□□□□ 0.98
SDF4-206ENST00000478938 ADGRA2Q96PE1 1338 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 UPK1AO00322 258 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 TBC1D4O60343 1298 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 NOBOXO60393 691 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 APOA1P02647 267 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 PCNAP12004 261 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 UQCRC1P31930 480 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 ZNF143P52747 638 aaPredicted RBP21.17■□□□□ 0.98
SDF4-206ENST00000478938 EIF2B5Q13144 721 aaKnown RBP21.17■□□□□ 0.98
SDF4-206ENST00000478938 STK11Q15831 433 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 ZNF404Q494X3 552 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 RABL3Q5HYI8 236 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 GALNT7Q86SF2 657 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 COLGALT1Q8NBJ5 622 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 RXFP2Q8WXD0 754 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 CGRRF1Q99675 332 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 MEAF6Q9HAF1 191 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 A0A0J9YYE9 177 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 TARM1B6A8C7 271 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 CCNE2O96020 404 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 CAPN3P20807 821 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 GSK3BP49841 420 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 APLP1P51693 650 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 AP2S1P53680 142 aaPredicted RBP21.17■□□□□ 0.98
SDF4-206ENST00000478938 TARDBPQ13148 414 aaKnown RBP eCLIP21.17■□□□□ 0.98
SDF4-206ENST00000478938 ERAP2Q6P179 960 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 BEND5Q7L4P6 421 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 TXNDC5Q8NBS9 432 aaKnown RBP21.17■□□□□ 0.98
SDF4-206ENST00000478938 APPL2Q8NEU8 664 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 IL31RAQ8NI17 732 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 MCOLN3Q8TDD5 553 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 MAGEB5Q9BZ81 275 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 PIF1Q9H611 641 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 ZBTB20Q9HC78 741 aaPredicted RBP21.17■□□□□ 0.98
SDF4-206ENST00000478938 MFHAS1Q9Y4C4 1052 aa21.17■□□□□ 0.98
SDF4-206ENST00000478938 ASS1P00966 412 aaKnown RBP21.16■□□□□ 0.98
SDF4-206ENST00000478938 PDGFRAP16234 1089 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 FRG1Q14331 258 aaKnown RBP21.16■□□□□ 0.98
SDF4-206ENST00000478938 KIF19Q2TAC6 998 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 UGT3A2Q3SY77 523 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 SPANXN3Q5MJ09 141 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 PNCKQ6P2M8 343 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 NOXA1Q86UR1 476 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 NT5DC4Q86YG4 428 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 CENPLQ8N0S6 344 aaPredicted RBP21.16■□□□□ 0.98
SDF4-206ENST00000478938 PAPD5Q8NDF8 572 aaKnown RBP21.16■□□□□ 0.98
SDF4-206ENST00000478938 CNIH3Q8TBE1 160 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 FYTTD1Q96QD9 318 aaKnown RBP21.16■□□□□ 0.98
SDF4-206ENST00000478938 HOPXQ9BPY8 73 aaPredicted RBP21.16■□□□□ 0.98
SDF4-206ENST00000478938 ACAT2Q9BWD1 397 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 BEX2Q9BXY8 128 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 DCSTAMPQ9H295 470 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 POMKQ9H5K3 350 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 USP2O75604 605 aaPredicted RBP21.16■□□□□ 0.98
SDF4-206ENST00000478938 GDF11O95390 407 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 HLA-DOAP06340 250 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 GPD1P21695 349 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 IL32P24001 234 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 CYP2F1P24903 491 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 WEE1P30291 646 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 SERPINH1P50454 418 aaKnown RBP21.16■□□□□ 0.98
SDF4-206ENST00000478938 HS3ST5Q8IZT8 346 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 CYP4F12Q9HCS2 524 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 PRDM8Q9NQV8 689 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 TAS2R9Q9NYW1 312 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 SLX4Q8IY92 1834 aa21.16■□□□□ 0.98
SDF4-206ENST00000478938 NRAPQ86VF7 1730 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 KPNA6O60684 536 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 PRKD3O94806 890 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 ALDOCP09972 364 aaKnown RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 ACVR2AP27037 513 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 BCL7AQ4VC05 210 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 TPRG1LQ5T0D9 272 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 TTC23Q5W5X9 447 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 KCTD20Q7Z5Y7 419 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 NEDD4LQ96PU5 975 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 QKIQ96PU8 341 aaKnown RBP eCLIP21.15■□□□□ 0.98
SDF4-206ENST00000478938 CNPY3Q9BT09 278 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 RANGRFQ9HD47 186 aaPredicted RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 NGRNQ9NPE2 291 aaKnown RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 ZMAT5Q9UDW3 170 aaKnown RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 PCP4L1A6NKN8 68 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 LYPLA2O95372 231 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 SLC35E2BP0CK96 405 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 CD6P30203 668 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 RAP1GAPP47736 663 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 NFIAQ12857 509 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 TRAF3Q13114 568 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 ACOX1Q15067 660 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 KIAA1841Q6NSI8 718 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 DNAJB14Q8TBM8 379 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms