RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ADAM22Q9P0K1 906 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 KIAA1468Q9P260 1216 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 KCND3Q9UK17 655 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 MAP4K5Q9Y4K4 846 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 PCDHGC4Q9Y5F7 938 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 PCDHGA6Q9Y5G7 932 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 FBN2P35556 2912 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 CDC14CA4D256 554 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 SIGLEC16A6NMB1 481 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 INPP4BO15327 924 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 GFPT2O94808 682 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 SORBS2O94875 1100 aaKnown RBP20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 RECKO95980 971 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 UNGP13051 313 aaPredicted RBP20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 DCTP40126 519 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 MAPK9P45984 424 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 GPR1P46091 355 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 RENBPP51606 427 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 TMCO4Q5TGY1 634 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 ARHGAP36Q6ZRI8 547 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 TECPR1Q7Z6L1 1165 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 GALNT6Q8NCL4 622 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 PDCD6IPQ8WUM4 868 aaKnown RBP20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 STAMBPL1Q96FJ0 436 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 MCCC1Q96RQ3 725 aaPredicted RBP20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 TWSG1Q9GZX9 223 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 ESPL1Q14674 2120 aa20.09■□□□□ 0.81
PDLIM1-202ENST00000477757 TCRBV5S1A1TA0A578 114 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 KATNA1O75449 491 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 CREG1O75629 220 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 DNAJB5O75953 348 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 CALB1P05937 261 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 TNFAIP3P21580 790 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 FOXM1Q08050 763 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 TPD52L1Q16890 204 aaPredicted RBP20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 LYSMD3Q7Z3D4 306 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 TSPAN33Q86UF1 283 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 PHF13Q86YI8 300 aaPredicted RBP20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 TICAM1Q8IUC6 712 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 LZTR1Q8N653 840 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 NPWQ8N729 165 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 SCRN2Q96FV2 425 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 MCEEQ96PE7 176 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 CNPY3Q9BT09 278 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 TRIM55Q9BYV6 548 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 GPATCH2LQ9NWQ4 482 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 RCOR3Q9P2K3 495 aaPredicted RBP20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 PHTF1Q9UMS5 762 aa20.08■□□□□ 0.81
PDLIM1-202ENST00000477757 CSMD1Q96PZ7 3565 aa20.08■□□□□ 0.8
PDLIM1-202ENST00000477757 TTC24A2A3L6 582 aaPredicted RBP20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 ANKRD62A6NC57 917 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 A6NCN8 305 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 GOLGA6L3A6NEY3 463 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 EIF3CLB5ME19 914 aaKnown RBP20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 DFFAO00273 331 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 EEF2KO00418 725 aaKnown RBP20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 PGDP52209 483 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 TRAF2Q12933 501 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 SEMA5AQ13591 1074 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 LBRQ14739 615 aaKnown RBP20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 DNAJC24Q6P3W2 148 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 IYDQ6PHW0 289 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 PLXDC1Q8IUK5 500 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 AP2M1Q96CW1 435 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 RNF31Q96EP0 1072 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 PCDHB18PQ96TA0 734 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 EIF3CQ99613 913 aaKnown RBP20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 HERPUD2Q9BSE4 406 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 ABCG8Q9H221 673 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 GANQ9H2C0 597 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 TBC1D29Q9UFV1 150 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 AP4E1Q9UPM8 1137 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 OTOGQ6ZRI0 2925 aa20.07■□□□□ 0.8
PDLIM1-202ENST00000477757 LILRA5A6NI73 299 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 HSPA9P38646 679 aaKnown RBP20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 GARSP41250 739 aaKnown RBP20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 GFERP55789 205 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 SLC10A7Q0GE19 358 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 DNASE1L3Q13609 305 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 ZNF235Q14590 738 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 IL11RAQ14626 422 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 CLEC16AQ2KHT3 1053 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 NADK2Q4G0N4 442 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 RFLNAQ6ZTI6 216 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 RFX8Q6ZV50 586 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 USP45Q70EL2 814 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 MON1BQ7L1V2 547 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 ZNF765Q7L2R6 523 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 SLC9B2Q86UD5 537 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 COX14Q96I36 57 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 C9orf72Q96LT7 481 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 ZNF599Q96NL3 588 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 NUDCD1Q96RS6 583 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 CASS4Q9NQ75 786 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 CNOT8Q9UFF9 292 aaKnown RBP20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 CD84Q9UIB8 345 aa20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 PCYT1BQ9Y5K3 369 aaPredicted RBP20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 TNRC6AQ8NDV7 1962 aaKnown RBP20.06■□□□□ 0.8
PDLIM1-202ENST00000477757 PIPSLA2A3N6 862 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms