RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SEZ6Q53EL9 994 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 MORN1Q5T089 497 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 CDH24Q86UP0 819 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 LINC01465Q8N7H1 131 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 ANKFN1Q8N957 763 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 C1orf54Q8WWF1 131 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 AHCYL2Q96HN2 611 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 PCDHB18PQ96TA0 734 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 SLC6A15Q9H2J7 730 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 ACSS3Q9H6R3 686 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 RPF1Q9H9Y2 349 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 MAN2B2Q9Y2E5 1009 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 PRELID3BQ9Y3B1 194 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 SH3D21A4FU49 640 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 SCO1O75880 301 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 WDPCPO95876 746 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 IL7P13232 177 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 ME2P23368 584 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 DAB2P98082 770 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 RIPPLY1Q0D2K3 151 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 IKZF1Q13422 519 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 GRIK4Q16099 956 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 Q5BKY6 102 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 ACAD10Q6JQN1 1059 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 TMEM65Q6PI78 240 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 CRTC3Q6UUV7 619 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 ZBTB49Q6ZSB9 765 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 CREB3L2Q70SY1 520 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 ARCQ7LC44 396 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 THNSL1Q8IYQ7 743 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 DDX1Q92499 740 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 PAFAH2Q99487 392 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 EBF4Q9BQW3 602 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 BRD9Q9H8M2 597 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 NMRK2Q9NPI5 230 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 DNAJC28Q9NX36 388 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 REV1Q9UBZ9 1251 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 ZSWIM8A7E2V4 1837 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 A0A087WZ62 844 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 PLD2O14939 933 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 ZNF623O75123 536 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 SLC4A1P02730 911 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 HOXC6P09630 235 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 XRCC1P18887 633 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 MAOBP27338 520 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 ERP29P30040 261 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 RAP1GAPP47736 663 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 HOXA1P49639 335 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 OR2B6P58173 313 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 RPP38P78345 283 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 SLC36A3Q495N2 470 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 PAGE2BQ5JRK9 111 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 INTS11Q5TA45 600 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 LINC00523Q86TU6 105 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 RASGRP3Q8IV61 690 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 TP53I13Q8NBR0 393 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 ZFAND1Q8TCF1 268 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 APBB2Q92870 758 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 FOXJ1Q92949 421 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 NCLNQ969V3 563 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 FKBP10Q96AY3 582 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 ZNF668Q96K58 619 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 GAL3ST1Q99999 423 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 FDXACB1Q9BRP7 624 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 ADI1Q9BV57 179 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 CDT1Q9H211 546 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 UCK1Q9HA47 277 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 MRM3Q9HC36 420 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 IARS2Q9NSE4 1012 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 PRKAG2Q9UGJ0 569 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 HMX3A6NHT5 357 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 APOA1P02647 267 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 TSHRP16473 764 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 TCN1P20061 433 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 GLDCP23378 1020 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 GRIA1P42261 906 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 TFAMQ00059 246 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 UBE3AQ05086 875 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 BROXQ5VW32 411 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 RGMBQ6NW40 437 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 DPY19L3Q6ZPD9 716 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 SH2D5Q6ZV89 423 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 PIWIL2Q8TC59 973 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 SEPT8Q92599 483 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 FBXW5Q969U6 566 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 FAM84AQ96KN4 292 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 TEKT5Q96M29 485 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 MOGAT1Q96PD6 335 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 MNTQ99583 582 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 LHX5Q9H2C1 402 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 C12orf65Q9H3J6 166 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 MINDY3Q9H8M7 445 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 SPC25Q9HBM1 224 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 APOBEC3GQ9HC16 384 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 ACP6Q9NPH0 428 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 IFT46Q9NQC8 304 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms