RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 GSNP06396 782 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 STAG3L1P0CL83 205 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 BMPR1AP36894 532 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 CASP2P42575 452 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 STAT5BP51692 787 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 APLP1P51693 650 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 GP2P55259 537 aaKnown RBP13.4□□□□□ -0.27
DFFB-209ENST00000477548 COPZ1P61923 177 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 CDH17Q12864 832 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 MXD4Q14582 209 aaPredicted RBP13.4□□□□□ -0.27
DFFB-209ENST00000477548 ARHGEF6Q15052 776 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 DPY19L1Q2PZI1 675 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 KCTD11Q693B1 232 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 LINC00299Q6ZSB3 139 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 AFG1LQ8WV93 481 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 FAM149B1Q96BN6 582 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 BIRC7Q96CA5 298 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 NODALQ96S42 347 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 C2orf49Q9BVC5 232 aaPredicted RBP13.4□□□□□ -0.27
DFFB-209ENST00000477548 NEK6Q9HC98 313 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 FBXO8Q9NRD0 319 aa13.4□□□□□ -0.27
DFFB-209ENST00000477548 MAGED1Q9Y5V3 778 aaPredicted RBP13.4□□□□□ -0.27
DFFB-209ENST00000477548 A0A1W2PQ67 120 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 EEF2KO00418 725 aaKnown RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 FARP2O94887 1054 aaPredicted RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 SEC24AO95486 1093 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 ENO2P09104 434 aaPredicted RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 HIST2H2ACQ16777 129 aaPredicted RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 UGT3A2Q3SY77 523 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 PKDCCQ504Y2 493 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 TTC23Q5W5X9 447 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 CYHR1Q6ZMK1 362 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 ELMOD1Q8N336 334 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 PAPD5Q8NDF8 572 aaKnown RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 DNERQ8NFT8 737 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 MUC13Q9H3R2 512 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 TOR3AQ9H497 397 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 PCDHGA3Q9Y5H0 932 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 PCDHA9Q9Y5H5 950 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 ZNF99A8MXY4 864 aaPredicted RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 UBFD1O14562 309 aaKnown RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 AXIN1O15169 862 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 RFPL2O75678 378 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 GJB1P08034 283 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 PTPRAP18433 802 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 MZF1P28698 734 aaPredicted RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 CD40LGP29965 261 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 BACE1P56817 501 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 VBP1P61758 197 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 ADPRMQ3LIE5 342 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 TECRLQ5HYJ1 363 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 PPP2R2DQ66LE6 453 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 STRADAQ7RTN6 431 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 CHDHQ8NE62 594 aaPredicted RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 ZNF555Q8NEP9 628 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 TMBIM1Q969X1 311 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 TMEM125Q96AQ2 219 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 VPS33AQ96AX1 596 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 SDCCAG3Q96C92 435 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 LPIN3Q9BQK8 851 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 RNF38Q9H0F5 515 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 TRIT1Q9H3H1 467 aaKnown RBP13.39□□□□□ -0.27
DFFB-209ENST00000477548 R3HDMLQ9H3Y0 253 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 MARCH7Q9H992 704 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 LTB4R2Q9NPC1 389 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 DSEQ9UL01 958 aa13.39□□□□□ -0.27
DFFB-209ENST00000477548 SYCE1LA8MT33 242 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 RGS13O14921 159 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 ALPLP05186 524 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 PCNAP12004 261 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 ITIH1P19827 911 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 CD68P34810 354 aaPredicted RBP13.38□□□□□ -0.27
DFFB-209ENST00000477548 CDC20Q12834 499 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 TNFAIP1Q13829 316 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 POU6F1Q14863 301 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
DFFB-209ENST00000477548 BTBD8Q5XKL5 378 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 PAGE2Q7Z2X7 111 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 TTC39CQ8N584 583 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 POC5Q8NA72 575 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 TRIM54Q9BYV2 358 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 SP140LQ9H930 580 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 IGSF5Q9NSI5 407 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 PTGDR2Q9Y5Y4 395 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 ZFC3H1O60293 1989 aaKnown RBP13.38□□□□□ -0.27
DFFB-209ENST00000477548 M0QX08 132 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 MSL3P1P0C860 447 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 FOSL1P15407 271 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 TCF3P15923 654 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 AGXTP21549 392 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 ADORA2BP29275 332 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 POLD2P49005 469 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 SEPHS1P49903 392 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 GABARAPL2P60520 117 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 TMEM132DQ14C87 1099 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 RSBN1Q5VWQ0 802 aaPredicted RBP13.38□□□□□ -0.27
DFFB-209ENST00000477548 NAPEPLDQ6IQ20 393 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 TMC5Q6UXY8 1006 aa13.38□□□□□ -0.27
DFFB-209ENST00000477548 PDZD4Q76G19 769 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms