RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	PTPRD	P23468	1912 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF638	Q14966	1978 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289		A0A1B0GVM2	712 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GRID2IP	A4D2P6	1211 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	C2CD4B	A6NLJ0	364 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF891	A8MT65	544 aa	Predicted RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SPECC1L-ADORA2A	F8WAN1	911 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	EEF2K	O00418	725 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TIMM44	O43615	452 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TBL1X	O60907	577 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CLDN11	O75508	207 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ALDH1A2	O94788	518 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PROSC	O94903	275 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PCDH8	O95206	1070 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LUC7L3	O95232	432 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LCA5L	O95447	670 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ASMTL	O95671	621 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CYP1A2	P05177	515 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RHOC	P08134	193 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TNNT1	P13805	278 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TYR	P14679	529 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZFX	P17010	805 aa	Predicted RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	POLR2E	P19388	210 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FCAR	P24071	287 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	EPHB2	P29323	1055 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SERPINB6	P35237	376 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ADRA1B	P35368	520 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PCK1	P35558	622 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GJC1	P36383	396 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CDH4	P55283	916 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GEMIN4	P57678	1058 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TPI1	P60174	286 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SULT2A1	Q06520	285 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CD69	Q07108	199 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PTP4A2	Q12974	167 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC12A1	Q13621	1099 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PDK2	Q15119	407 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TAF5	Q15542	800 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CCDC14	Q49A88	953 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DGKK	Q5KSL6	1271 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LY6G5C	Q5SRR4	150 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RAP1GAP2	Q684P5	730 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TPRG1	Q6ZUI0	275 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PEX26	Q7Z412	305 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	BBS7	Q8IWZ6	715 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZZZ3	Q8IYH5	903 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	UNC5B	Q8IZJ1	945 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	AHI1	Q8N157	1196 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NXPE1	Q8N323	547 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	BBS5	Q8N3I7	341 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SYNPO	Q8N3V7	929 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CARNMT1	Q8N4J0	409 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RNF10	Q8N5U6	811 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PAF1	Q8N7H5	531 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	JOSD2	Q8TAC2	188 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TTC8	Q8TAM2	541 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KIAA1524	Q8TCG1	905 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CPT1C	Q8TCG5	803 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PROKR1	Q8TCW9	393 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HSPH1	Q92598	858 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NTAN1	Q96AB6	310 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZFYVE19	Q96K21	471 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HIST1H2AH	Q96KK5	128 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	C1orf74	Q96LT6	269 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CCDC114	Q96M63	670 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC22A12	Q96S37	553 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HIST1H2AJ	Q99878	128 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SYT11	Q9BT88	431 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PLA2G2F	Q9BZM2	168 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZYG11B	Q9C0D3	744 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF768	Q9H5H4	540 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DHX35	Q9H5Z1	703 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HEBP1	Q9NRV9	189 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PIGV	Q9NUD9	493 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GTSE1	Q9NYZ3	720 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	OR12D3	Q9UGF7	316 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PCSK1N	Q9UHG2	260 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC25A13	Q9UJS0	675 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	AMFR	Q9UKV5	643 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	USP18	Q9UMW8	372 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NDRG2	Q9UN36	371 aa	Known RBP	4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CCL26	Q9Y258	94 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ATG2A	Q2TAZ0	1938 aa		4.6	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KANSL1L	A0AUZ9	987 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MACROD2	A1Z1Q3	448 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TMEM221	A6NGB7	291 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ARHGAP42	A6NI28	874 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	BTNL10	A8MVZ5	291 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MIF4GD	A9UHW6	222 aa	Known RBP	4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	AHRR	A9YTQ3	701 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289		E9PAM4	449 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289		M0R296	226 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NPC1	O15118	1278 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HOXC11	O43248	304 aa	Predicted RBP	4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	BUB1	O43683	1085 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KIF5C	O60282	957 aa		4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SYNCRIP	O60506	623 aa	Known RBP	4.59	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RNASEH1	O60930	286 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms