RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ANKDD1AQ495B1 522 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 SLC39A12Q504Y0 691 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 AKNAD1Q5T1N1 836 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 C10orf76Q5T2E6 689 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 LRIF1Q5T3J3 769 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 DAB2IPQ5VWQ8 1189 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 ZNF474Q6S9Z5 364 aaPredicted RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 KCTD9Q7L273 389 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TFAP2DQ7Z6R9 452 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 CEP57Q86XR8 500 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 RNF168Q8IYW5 571 aaPredicted RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 FBXO39Q8N4B4 442 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 RTL3Q8N8U3 475 aaKnown RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 OR52N4Q8NGI2 321 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 OR8K5Q8NH50 307 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 RASSF8Q8NHQ8 419 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 PRCCQ92733 491 aaPredicted RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 ATOH1Q92858 354 aaPredicted RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TEKT1Q969V4 418 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 NXNL1Q96CM4 212 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 REPS1Q96D71 796 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 BICD1Q96G01 975 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 HARBI1Q96MB7 349 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TMEM47Q9BQJ4 181 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 SYT17Q9BSW7 474 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 C1QTNF5Q9BXJ0 243 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TKTL2Q9H0I9 626 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 MMP27Q9H306 513 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 PLEKHA4Q9H4M7 779 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 DENND2DQ9H6A0 471 aaPredicted RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 LIN28AQ9H9Z2 209 aaKnown RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 CPNE5Q9HCH3 593 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TXNRD2Q9NNW7 524 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 PIH1D3Q9NQM4 214 aaKnown RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 IL17RBQ9NRM6 502 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 GRHL1Q9NZI5 618 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 SLC17A6Q9P2U8 582 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TRPC4Q9UBN4 977 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 FBXO40Q9UH90 709 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 IL19Q9UHD0 177 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 SLC24A2Q9UI40 661 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 HACL1Q9UJ83 578 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 FBXW11Q9UKB1 542 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 CDH7Q9ULB5 785 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TNFSF13BQ9Y275 285 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 SPAG9O60271 1321 aaKnown RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 A0A0B4J293 547 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 C1orf226A1L170 272 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 MAGEB17A8MXT2 336 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 NPIPB8E9PQR5 432 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 SMIM22K7EJ46 135 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 RRHO14718 337 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 MSI1O43347 362 aaKnown RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 TLR2O60603 784 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 NOL3O60936 208 aaKnown RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 SOCS5O75159 536 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 RSL1D1O76021 490 aaKnown RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 HIST1H2ABP04908 130 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 HEXBP07686 556 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 VIMP08670 466 aaKnown RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 FAM58BPP0C7Q3 252 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CYP2A6P11509 494 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 FERP16591 822 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 KRT4P19013 534 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 HIST1H2ADP20671 130 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 IL10P22301 178 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 KLRC2P26717 231 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 YWHAQP27348 245 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 EPHB2P29323 1055 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 TACR3P29371 465 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CTNNB1P35222 781 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 PRPHP41219 470 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CASP3P42574 277 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 SOX2P48431 317 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 ZNF81P51508 661 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 GPC3P51654 580 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CLCN5P51795 746 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 TKTL1P51854 596 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CDH13P55290 713 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 SOX10P56693 466 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 AKAP17AQ02040 695 aaKnown RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 RHAGQ02094 409 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 PPATQ06203 517 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CXCL9Q07325 125 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 MTA1Q13330 715 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 PPIGQ13427 754 aaKnown RBP eCLIP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 GALNT3Q14435 633 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 MYLK3Q32MK0 819 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CERKLQ49MI3 558 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CDONQ4KMG0 1287 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CBWD6Q4V339 395 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 CBWD3Q5JTY5 395 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 RARS2Q5T160 578 aaKnown RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 DHRS7BQ6IAN0 325 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 C11orf57Q6ZUT1 292 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-207ENST00000476169 HIST3H2AQ7L7L0 130 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 HAUS6Q7Z4H7 955 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 AMIGO2Q86SJ2 522 aa4.22□□□□□ -1.73
VPS13D-207ENST00000476169 ADCK1Q86TW2 530 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms