RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 MMP2P08253 660 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 SLC2A4P14672 509 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 PTPN3P26045 913 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 CTNNA1P35221 906 aaKnown RBP13.71□□□□□ -0.21
TMCO1-205ENST00000476143 ATP5OP48047 213 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 RWDD2BP57060 319 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 ERVPABLB-1P60509 514 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 XRCC4Q13426 336 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 PTPRRQ15256 657 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 TAZQ16635 292 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 CERCAMQ5T4B2 595 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 ITPRIPL1Q6GPH6 555 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 FOXR1Q6PIV2 292 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 OGFOD3Q6PK18 319 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 C19orf48Q6RUI8 117 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 MARK2Q7KZI7 788 aaKnown RBP13.71□□□□□ -0.21
TMCO1-205ENST00000476143 PID1Q7Z2X4 250 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 CCNJLQ8IV13 435 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 CDKL3Q8IVW4 592 aaPredicted RBP13.71□□□□□ -0.21
TMCO1-205ENST00000476143 PELI3Q8N2H9 469 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 UBL4BQ8N7F7 174 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 ZNF248Q8NDW4 579 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 SNIP1Q8TAD8 396 aaKnown RBP13.71□□□□□ -0.21
TMCO1-205ENST00000476143 HNRNPLLQ8WVV9 542 aaKnown RBP13.71□□□□□ -0.21
TMCO1-205ENST00000476143 HTR3CQ8WXA8 447 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 ZSCAN5AQ9BUG6 496 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 FSD1LQ9BXM9 530 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 LRRN3Q9H3W5 708 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 TAAR2Q9P1P5 351 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 VPS18Q9P253 973 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 ZNHIT2Q9UHR6 403 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 APPL1Q9UKG1 709 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 TRHDEQ9UKU6 1024 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 SATB2Q9UPW6 733 aa13.71□□□□□ -0.21
TMCO1-205ENST00000476143 RP1P56715 2156 aa13.71□□□□□ -0.22
TMCO1-205ENST00000476143 URB1O60287 2271 aaKnown RBP13.7□□□□□ -0.22
TMCO1-205ENST00000476143 AKAP13Q12802 2813 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 ASXL3Q9C0F0 2248 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 A0A087WV48 116 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 TJP3O95049 919 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 PECAM1P16284 738 aaPredicted RBP13.7□□□□□ -0.22
TMCO1-205ENST00000476143 FECHP22830 423 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 CDC25BP30305 580 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 ADCY8P40145 1251 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 EIF2S3P41091 472 aaKnown RBP13.7□□□□□ -0.22
TMCO1-205ENST00000476143 MLLT3P42568 568 aaPredicted RBP13.7□□□□□ -0.22
TMCO1-205ENST00000476143 POLD2P49005 469 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 INHBCP55103 352 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 CTBSQ01459 385 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 MPP3Q13368 585 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 PRPSAP1Q14558 356 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 MAP9Q49MG5 647 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 BROXQ5VW32 411 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 ZDHHC20Q5W0Z9 365 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 PDPK2PQ6A1A2 396 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 BBS12Q6ZW61 710 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 LYSMD3Q7Z3D4 306 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 PEX26Q7Z412 305 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 Q8N9G6 341 aaPredicted RBP13.7□□□□□ -0.22
TMCO1-205ENST00000476143 CCL4L1Q8NHW4 92 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 CCDC97Q96F63 343 aaPredicted RBP13.7□□□□□ -0.22
TMCO1-205ENST00000476143 ATXN7L3BQ96GX2 97 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 PPP1R2P1Q96PQ5 205 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 QKIQ96PU8 341 aaKnown RBP eCLIP13.7□□□□□ -0.227e-9■■■■■ 36.4
TMCO1-205ENST00000476143 SMIM14Q96QK8 99 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 HEMGNQ9BXL5 484 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 TRABDQ9H4I3 376 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 EPB41L5Q9HCM4 733 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 HACD3Q9P035 362 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 SAE1Q9UBE0 346 aaPredicted RBP13.7□□□□□ -0.22
TMCO1-205ENST00000476143 RSPH14Q9UHP6 348 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 AMFRQ9UKV5 643 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 TFR2Q9UP52 801 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 SHOC2Q9UQ13 582 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 EFR3BQ9Y2G0 817 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 TMEM98Q9Y2Y6 226 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 ZNF711Q9Y462 761 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 PCDHGA8Q9Y5G5 932 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 PCDHA3Q9Y5H8 950 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 ENTPD2Q9Y5L3 495 aa13.7□□□□□ -0.22
TMCO1-205ENST00000476143 ADAMTS20P59510 1910 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 A0A0U1RQS6 177 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 GPR89AB7ZAQ6 455 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 D6RAR5 112 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 NTN3O00634 580 aaPredicted RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 NOBOXO60393 691 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 ANXA9O76027 345 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 DXOO77932 396 aaKnown RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 MT-CYBP00156 380 aaPredicted RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 GPR89BP0CG08 455 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 NFKB1P19838 968 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 AK4P27144 223 aaPredicted RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 DCDC1P59894 354 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 HLTFQ14527 1009 aaKnown RBP eCLIP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 COL28A1Q2UY09 1125 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 HENMT1Q5T8I9 393 aaKnown RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 ALS2CLQ60I27 953 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 KCTD16Q68DU8 428 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms