RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ERVK-10P10266 1014 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 KRT4P19013 534 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 SERPINA4P29622 427 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 RPA3P35244 121 aaPredicted RBP14.78□□□□□ -0.04
LMNA-213ENST00000473598 GRIA4P48058 902 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 ST8SIA6P61647 398 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 RAD51Q06609 339 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 SF3A3Q12874 501 aaKnown RBP eCLIP14.78□□□□□ -0.04
LMNA-213ENST00000473598 GRM3Q14832 879 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 TSTD2Q5T7W7 516 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 ESRP1Q6NXG1 681 aaKnown RBP14.78□□□□□ -0.04
LMNA-213ENST00000473598 MARK2Q7KZI7 788 aaKnown RBP14.78□□□□□ -0.04
LMNA-213ENST00000473598 NLRP9Q7RTR0 991 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 GFM2Q969S9 779 aaKnown RBP14.78□□□□□ -0.04
LMNA-213ENST00000473598 EPB41L1Q9H4G0 881 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.78□□□□□ -0.04
LMNA-213ENST00000473598 SLC2A6Q9UGQ3 507 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 MUTYHQ9UIF7 546 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 IKBKGQ9Y6K9 419 aa14.78□□□□□ -0.04
LMNA-213ENST00000473598 TBC1D3BA6NDS4 549 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 WASH3PC4AMC7 463 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 INHBAP08476 426 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 PIRTP0C851 137 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 TAC1P20366 129 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 FOXN2P32314 431 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 RECQLP46063 649 aaPredicted RBP14.77□□□□□ -0.04
LMNA-213ENST00000473598 SERPINB8P50452 374 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 RPL26P61254 145 aaKnown RBP14.77□□□□□ -0.04
LMNA-213ENST00000473598 NAB1Q13506 487 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 ITGA9Q13797 1035 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 KCNMB4Q86W47 210 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 SLC26A11Q86WA9 606 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 SLC44A3Q8N4M1 653 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 KDM1BQ8NB78 822 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 PIH1D2Q8WWB5 315 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 PEX13Q92968 403 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 C20orf96Q9NUD7 363 aaPredicted RBP14.77□□□□□ -0.04
LMNA-213ENST00000473598 PTTG2Q9NZH5 202 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 SPO11Q9Y5K1 396 aa14.77□□□□□ -0.04
LMNA-213ENST00000473598 SMIM31A0A1B0GVY4 71 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 KAT7O95251 611 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 PAMP19021 973 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 EPHB1P54762 984 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 CNGA3Q16281 694 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 CLPPQ16740 277 aaPredicted RBP14.76□□□□□ -0.05
LMNA-213ENST00000473598 PDPK2PQ6A1A2 396 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 KIAA0930Q6ICG6 404 aaPredicted RBP14.76□□□□□ -0.05
LMNA-213ENST00000473598 LRRC74BQ6ZQY2 392 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 SPATA24Q86W54 205 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 RASSF3Q86WH2 238 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 SFTPA1Q8IWL2 248 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 SLC15A3Q8IY34 581 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 ST13P4Q8IZP2 240 aaPredicted RBP14.76□□□□□ -0.05
LMNA-213ENST00000473598 CHST14Q8NCH0 376 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 MDGA1Q8NFP4 955 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 CSGALNACT1Q8TDX6 532 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 ZNF641Q96N77 438 aaPredicted RBP14.76□□□□□ -0.05
LMNA-213ENST00000473598 SUV39H2Q9H5I1 410 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 ZDHHC6Q9H6R6 413 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 ZNF180Q9UJW8 692 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 ARL5AQ9Y689 179 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 IQANK1A0A1B0GTG1 560 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 MAP3K7O43318 606 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 UGT1A9O60656 530 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 SUPT3HO75486 399 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 CRTAMO95727 393 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 CPA3P15088 417 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 GRIA2P42262 883 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 ARCN1P48444 511 aaKnown RBP14.76□□□□□ -0.05
LMNA-213ENST00000473598 SLC34A1Q06495 639 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 HSP90AA5PQ58FG0 334 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 TEDDM1Q5T9Z0 273 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 RGS9BPQ6ZS82 235 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 GLT6D1Q7Z4J2 308 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 OR13J1Q8NGT2 312 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 ALKBH8Q96BT7 664 aaKnown RBP14.76□□□□□ -0.05
LMNA-213ENST00000473598 ECHDC3Q96DC8 303 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 SMIM14Q96QK8 99 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 HEPHQ9BQS7 1158 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 COL25A1Q9BXS0 654 aaPredicted RBP14.76□□□□□ -0.05
LMNA-213ENST00000473598 UGT1A7Q9HAW7 530 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 UGT1A10Q9HAW8 530 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 UGT1A8Q9HAW9 530 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 RIMKLBQ9ULI2 386 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 KCTD3Q9Y597 815 aa14.76□□□□□ -0.05
LMNA-213ENST00000473598 H0Y3Z8 333 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 FAM155BO75949 473 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 ZWINTO95229 277 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 VAPBO95292 243 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 ARNTP27540 789 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 HOXD12P35452 270 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 CCNFP41002 786 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 SOX9P48436 509 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 GSTM4Q03013 218 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 TAF1AQ15573 450 aaPredicted RBP14.75□□□□□ -0.05
LMNA-213ENST00000473598 SMAD1Q15797 465 aaKnown RBP14.75□□□□□ -0.05
LMNA-213ENST00000473598 ADRM1Q16186 407 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 FNDC3BQ53EP0 1204 aaKnown RBP14.75□□□□□ -0.05
LMNA-213ENST00000473598 NUDT18Q6ZVK8 323 aa14.75□□□□□ -0.05
LMNA-213ENST00000473598 SDR16C5Q8N3Y7 309 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms