RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ZFYVE28Q9HCC9 887 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CSNK1G1Q9HCP0 422 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 AIG1Q9NVV5 245 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 C3orf18Q9UK00 162 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CDC14AQ9UNH5 594 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 A0A1W2PPW3 197 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 NRP1O14786 923 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 PIP5K1BO14986 540 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 GSTA4O15217 222 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 IRAK2O43187 625 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ATE1O95260 518 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FYNP06241 537 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 INHBBP09529 407 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 USP17L7P0C7H9 530 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ZNF286BP0CG31 522 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 NDUFV1P49821 464 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 POLR2JP52435 117 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 CRYBB1P53674 252 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 EMX2Q04743 252 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CBX2Q14781 532 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 NEDD8Q15843 81 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 NDUFA5Q16718 116 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 DGUOKQ16854 277 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 UGT3A2Q3SY77 523 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 VPS26BQ4G0F5 336 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 DUSP28Q4G0W2 176 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 MARC1Q5VT66 337 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 WSCD1Q658N2 575 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 DUS1LQ6P1R4 473 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 TMEM26Q6ZUK4 368 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 HFE2Q6ZVN8 426 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ISCA2Q86U28 154 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 TAC4Q86UU9 113 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 EPHX4Q8IUS5 362 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 THEM5Q8N1Q8 247 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SVOPQ8N4V2 548 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 DPP10Q8N608 796 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 TMCO5AQ8N6Q1 288 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 OR52E4Q8NGH9 312 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SPATA22Q8NHS9 363 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ITFG1Q8TB96 612 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 KIAA1191Q96A73 305 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 DCPSQ96C86 337 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 IMP4Q96G21 291 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 ABHD8Q96I13 439 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 TMEM209Q96SK2 561 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FEM1AQ9BSK4 669 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 C1QTNF3Q9BXJ4 246 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 DERL2Q9GZP9 239 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 LIN28AQ9H9Z2 209 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 CCNB1IP1Q9NPC3 277 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CMTM6Q9NX76 183 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 TAS2R13Q9NYV9 303 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 USE1Q9NZ43 259 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SELENONQ9NZV5 590 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 MAP10Q9P2G4 905 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 DNAJB9Q9UBS3 223 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CLEC11AQ9Y240 323 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 NEMP2A6NFY4 417 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 M0QZ92 97 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CLDN5O00501 218 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ACOX3O15254 700 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SPTLC1O15269 473 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 GPR32O75388 356 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SULT1C4O75897 302 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CDK14O94921 469 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 WISP3O95389 354 aaPredicted RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 EPOP01588 193 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 HLA-DQB2P05538 268 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 MMP3P08254 477 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CD1DP15813 335 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 YWHAQP27348 245 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ARSFP54793 590 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 MVKQ03426 396 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 KCNC4Q03721 635 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CLCQ05315 142 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 TRIM32Q13049 653 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ACOX1Q15067 660 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 PPP1R3AQ16821 1122 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 RBM20Q5T481 1227 aaKnown RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 AFMIDQ63HM1 303 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 TAPT1Q6NXT6 567 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 KDELC1Q6UW63 502 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 PAQR9Q6ZVX9 377 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 MFSD6LQ8IWD5 586 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SULF1Q8IWU6 871 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ADHFE1Q8IWW8 467 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 OR8J3Q8NGG0 315 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 BPIFB1Q8TDL5 484 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ACDQ96AP0 544 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CCDC115Q96NT0 180 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SMOQ99835 787 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 MTG1Q9BT17 334 aaPredicted RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 KATNAL1Q9BW62 490 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 FAM49AQ9H0Q0 323 aaPredicted RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 SMOC2Q9H3U7 446 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 RETREG1Q9H6L5 497 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SP110Q9HB58 689 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ATP13A1Q9HD20 1204 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 TMPRSS4Q9NRS4 437 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms