RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 SSR1P43307 286 aaKnown RBP10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 UQCRFS1P47985 274 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 RENBPP51606 427 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 GFERP55789 205 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 SH3BP2P78314 561 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 PTSQ03393 145 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 FOXM1Q08050 763 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 NSUN2Q08J23 767 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 DPYSQ14117 519 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 ERV3-1Q14264 604 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 PYCR3Q53H96 274 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 ALS2CLQ60I27 953 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 E4F1Q66K89 784 aaPredicted RBP10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 IRF2BP2Q7Z5L9 587 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 TECPR1Q7Z6L1 1165 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 GALNT13Q8IUC8 556 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 NLGN4XQ8N0W4 816 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 TTC30BQ8N4P2 665 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 BMPERQ8N8U9 685 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 CCDC112Q8NEF3 446 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 NLGN4YQ8NFZ3 816 aaPredicted RBP10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 OR10G6Q8NH81 332 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 PIH1D2Q8WWB5 315 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 DDA1Q9BW61 102 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 CDH19Q9H159 772 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 PRDM8Q9NQV8 689 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 PARVAQ9NVD7 372 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 MAN2B2Q9Y2E5 1009 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 PCDHGA3Q9Y5H0 932 aa10.03□□□□□ -0.8
SCAMP3-205ENST00000472397 NBASA2RRP1 2371 aa10.02□□□□□ -0.8
SCAMP3-205ENST00000472397 CDC14CA4D256 554 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 TMEM191CA6NGB0 347 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 PRR19A6NJB7 356 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 LRRC53A6NM62 1247 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 MAFKO60675 156 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 LRCH4O75427 683 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 CLDN7O95471 211 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 FTLP02792 175 aaPredicted RBP10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 CD48P09326 243 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 FERP16591 822 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 DESP17661 470 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 CR2P20023 1033 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 TCN2P20062 427 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 CASRP41180 1078 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 MMP13P45452 471 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 GPR3P46089 330 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 EPHB1P54762 984 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 AIF1P55008 147 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 MC2RQ01718 297 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 HHEXQ03014 270 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 RFTN1Q14699 578 aaPredicted RBP10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 NR1D2Q14995 579 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 SEPT7Q16181 437 aaKnown RBP10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 ASIC2Q16515 512 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 PLEKHA7Q6IQ23 1121 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 CRTC3Q6UUV7 619 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 TMCO3Q6UWJ1 677 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 ZNF571Q7Z3V5 609 aaPredicted RBP10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 CBARPQ8N350 705 aaPredicted RBP10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 ATPAF2Q8N5M1 289 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 GALNT6Q8NCL4 622 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 LPCAT1Q8NF37 534 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 STARD8Q92502 1023 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 KIAA1143Q96AT1 154 aaPredicted RBP10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 TGM7Q96PF1 710 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 RUFY1Q96T51 708 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 BRD8Q9H0E9 1235 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 ADNPQ9H2P0 1102 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 OSGEPL1Q9H4B0 414 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 HAUS4Q9H6D7 363 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 DTLQ9NZJ0 730 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 LIMA1Q9UHB6 759 aaKnown RBP10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 DNAJC16Q9Y2G8 782 aa10.02□□□□□ -0.81
SCAMP3-205ENST00000472397 FADS2P1A8MWK0 482 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 B4E171 279 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 DDX3XO00571 662 aaKnown RBP eCLIP10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 POLR1CO15160 346 aaPredicted RBP10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 DDX3YO15523 660 aaKnown RBP10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 ZW10O43264 779 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 KIF1CO43896 1103 aaKnown RBP10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 DNAJB5O75953 348 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 PIRTP0C851 137 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 RARAP10276 462 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 DLSTP36957 453 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 TSPAN7P41732 249 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 LEPRP48357 1165 aaKnown RBP10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 CHAF1BQ13112 559 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 TRA2AQ13595 282 aaKnown RBP eCLIP10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 ATP13A4Q4VNC1 1196 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 C4orf17Q53FE4 359 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 LACTB2Q53H82 288 aaPredicted RBP10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 MARC1Q5VT66 337 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 ADAMTSL4Q6UY14 1074 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 USP45Q70EL2 814 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 B4GALNT4Q76KP1 1039 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 SCRN2Q96FV2 425 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 SLC45A3Q96JT2 553 aa10.01□□□□□ -0.81
SCAMP3-205ENST00000472397 CSPG4P5Q96PW8 444 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms