RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 REEP2Q9BRK0 252 aa1.89□□□□□ -2.11
COMMD3-209ENST00000471350 INTS2Q9H0H0 1204 aaKnown RBP1.89□□□□□ -2.11
COMMD3-209ENST00000471350 WDR13Q9H1Z4 485 aa1.89□□□□□ -2.11
COMMD3-209ENST00000471350 BICC1Q9H694 974 aaKnown RBP1.89□□□□□ -2.11
COMMD3-209ENST00000471350 DDX4Q9NQI0 724 aaKnown RBP1.89□□□□□ -2.11
COMMD3-209ENST00000471350 ZDHHC18Q9NUE0 388 aa1.89□□□□□ -2.11
COMMD3-209ENST00000471350 RIPOR2Q9Y4F9 1068 aa1.89□□□□□ -2.11
COMMD3-209ENST00000471350 TEX13CA0A0J9YWL9 993 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 A0A0J9YWU9 116 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 GAGE10A6NGK3 116 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 NCAM2O15394 837 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 BUD23O43709 281 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 PRKNO60260 465 aaPredicted RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 CIDEAO60543 219 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 TACC1O75410 805 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 EGFP01133 1207 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 HOXB5P09067 269 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 IFIT1P09914 478 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 PRSS56P0CW18 603 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 NR2F2P24468 414 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 SHMT1P34896 483 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 AHRP35869 848 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 PSMC2P35998 433 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 NR2C2P49116 596 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 IRX6P78412 446 aaPredicted RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 KCNJ10P78508 379 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ACVR2BQ13705 512 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ITGA9Q13797 1035 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 UBE4AQ14139 1066 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 RNPS1Q15287 305 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 TAF5Q15542 800 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ZNF766Q5HY98 468 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ZNF667Q5HYK9 610 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 WDR38Q5JTN6 314 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 FBXO47Q5MNV8 452 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 DCST1Q5T197 706 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 MAP3K21Q5TCX8 1036 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ANO1Q5XXA6 986 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ATG16L1Q676U5 607 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ZNF790Q6PG37 636 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 FBXO46Q6PJ61 603 aaPredicted RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 BRAT1Q6PJG6 821 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 SLC22A25Q6T423 547 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 C15orf39Q6ZRI6 1047 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 GSTA5Q7RTV2 222 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 TDRPQ86YL5 185 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 MAP7D3Q8IWC1 876 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 DHX40Q8IX18 779 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 SPICE1Q8N0Z3 855 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 PCDH20Q8N6Y1 951 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 LSM14AQ8ND56 463 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 MAPK1IP1LQ8NDC0 245 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 OR52I2Q8NH67 350 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ZCCHC10Q8TBK6 192 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 TMEM190Q8WZ59 177 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 RILPL2Q969X0 211 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ABHD8Q96I13 439 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 MPHOSPH6Q99547 160 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 MPHOSPH8Q99549 860 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 OPRPNQ99935 248 aaPredicted RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 FAM110AQ9BQ89 295 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 DCTN5Q9BTE1 182 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 TRIM15Q9C019 465 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 MMP25Q9NPA2 562 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 SLC52A3Q9NQ40 469 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 TCP11L1Q9NUJ3 509 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 PPP1R14DQ9NXH3 145 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 A4GNTQ9UNA3 340 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 AAR2Q9Y312 384 aaKnown RBP1.88□□□□□ -2.11
COMMD3-209ENST00000471350 JRKLQ9Y4A0 524 aa1.88□□□□□ -2.11
COMMD3-209ENST00000471350 ANKRD66B4E2M5 251 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 USP17L23D6RBM5 183 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 NR5A2O00482 541 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 TSPAN4O14817 238 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 EIF3DO15371 548 aaKnown RBP eCLIP1.87□□□□□ -2.11
COMMD3-209ENST00000471350 PDE9AO76083 593 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 BAG4O95429 457 aaKnown RBP1.87□□□□□ -2.11
COMMD3-209ENST00000471350 PLA2G4BP0C869 781 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 COX7A2P14406 83 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 CSF2RAP15509 400 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 EDN2P20800 178 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 SP100P23497 879 aaPredicted RBP1.87□□□□□ -2.11
COMMD3-209ENST00000471350 HOXC8P31273 242 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 ARL1P40616 181 aaPredicted RBP1.87□□□□□ -2.11
COMMD3-209ENST00000471350 GNAQP50148 359 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 TAS2R38P59533 333 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 GNB1P62873 340 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 RPL24P83731 157 aaKnown RBP1.87□□□□□ -2.11
COMMD3-209ENST00000471350 UBE3AQ05086 875 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.87□□□□□ -2.11
COMMD3-209ENST00000471350 MAD2L1Q13257 205 aaPredicted RBP1.87□□□□□ -2.11
COMMD3-209ENST00000471350 C2orf68Q2NKX9 166 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 USP41Q3LFD5 358 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 ZFP69Q49AA0 526 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 TECRLQ5HYJ1 363 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 C6orf141Q5SZD1 244 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
COMMD3-209ENST00000471350 TXNDC8Q6A555 127 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms