RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 TIPARPQ7Z3E1 657 aaKnown RBP12.19□□□□□ -0.46
HDAC3-204ENST00000469207 CACNA2D3Q8IZS8 1091 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 ATPAF2Q8N5M1 289 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 BMPERQ8N8U9 685 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 AGBL5Q8NDL9 886 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 WDR24Q96S15 920 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 SLC38A3Q99624 504 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 ISCUQ9H1K1 167 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 APMAPQ9HDC9 416 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 ARFGAP3Q9NP61 516 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 MYO6Q9UM54 1294 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 PCDHGA3Q9Y5H0 932 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 A0A0J9YYE9 177 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 LOC101059948A0A1B0GTJ6 334 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 PSMD11O00231 422 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 DNAJC6O75061 913 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 PRLP01236 227 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 TRBC1P01850 177 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 TEAD1P28347 426 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 PRKCIP41743 596 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 ATP1A2P50993 1020 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 CDH6P55285 790 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 SLC25A11Q02978 314 aaKnown RBP12.18□□□□□ -0.46
HDAC3-204ENST00000469207 TLE1Q04724 770 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 TYRO3Q06418 890 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 NFATC2Q13469 925 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 TRA2AQ13595 282 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC3-204ENST00000469207 IGFBP7Q16270 282 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 ZNF648Q5T619 568 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-204ENST00000469207 PPP1R2P3Q6NXS1 205 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 ADAMTSL4Q6UY14 1074 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 USP45Q70EL2 814 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 BBS5Q8N3I7 341 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 SFRP1Q8N474 314 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 TEX26Q8N6G2 289 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 NSMCE1Q8WV22 266 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 NCSTNQ92542 709 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 AHCYL2Q96HN2 611 aaKnown RBP12.18□□□□□ -0.46
HDAC3-204ENST00000469207 COX14Q96I36 57 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 SPRY4Q9C004 299 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 B3GNT4Q9C0J1 378 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 ZMYND15Q9H091 742 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 THAP2Q9H0W7 228 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 CDH19Q9H159 772 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 ZNF71Q9NQZ8 489 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-204ENST00000469207 KCTD5Q9NXV2 234 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 TBC1D29Q9UFV1 150 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 KLHL3Q9UH77 587 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 PILRAQ9UKJ1 303 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 CNOT6Q9ULM6 557 aaKnown RBP12.18□□□□□ -0.46
HDAC3-204ENST00000469207 KCNK6Q9Y257 313 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 SCINQ9Y6U3 715 aa12.18□□□□□ -0.46
HDAC3-204ENST00000469207 RELNP78509 3460 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 ZW10O43264 779 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 MFSD11O43934 449 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 SNX2O60749 519 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 PPFIA2O75334 1257 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 PRKAR1AP10644 381 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 SFTPCP11686 197 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 GJC1P36383 396 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 SSR1P43307 286 aaKnown RBP12.17□□□□□ -0.46
HDAC3-204ENST00000469207 MAPK9P45984 424 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 FASLGP48023 281 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 ZNF135P52742 658 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-204ENST00000469207 STC1P52823 247 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 EPHB1P54762 984 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 POLE2P56282 527 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 NIPAL4Q0D2K0 466 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 CLPPQ16740 277 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-204ENST00000469207 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-204ENST00000469207 DCAF12Q5T6F0 453 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 ATP1A1-AS1Q5TC04 95 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 BORAQ6PGQ7 559 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 ARHGAP22Q7Z5H3 698 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 GALNT13Q8IUC8 556 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 EXD1Q8NHP7 514 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 ARRDC2Q8TBH0 407 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 RTP4Q96DX8 246 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 TBC1D10AQ9BXI6 508 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 MRPL47Q9HD33 250 aaKnown RBP12.17□□□□□ -0.46
HDAC3-204ENST00000469207 RBM22Q9NW64 420 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDAC3-204ENST00000469207 DTLQ9NZJ0 730 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 PDP2Q9P2J9 529 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 TTLL3Q9Y4R7 772 aa12.17□□□□□ -0.46
HDAC3-204ENST00000469207 FADS2P1A8MWK0 482 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 B4E171 279 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 NFKBIAP25963 317 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 TSPAN7P41732 249 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 ARSEP51690 589 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 GPLD1P80108 840 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 HHEXQ03014 270 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 SRSF1Q07955 248 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDAC3-204ENST00000469207 SLC10A2Q12908 348 aaPredicted RBP12.16□□□□□ -0.46
HDAC3-204ENST00000469207 KCNAB2Q13303 367 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 PIGHQ14442 188 aaPredicted RBP12.16□□□□□ -0.46
HDAC3-204ENST00000469207 KRT81Q14533 505 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 NR1I3Q14994 352 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 RALGPS1Q5JS13 557 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 HGSNATQ68CP4 663 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 NCBP2-AS2Q69YL0 99 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms