RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 ERO1BQ86YB8 467 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 TMCO5AQ8N6Q1 288 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 PHOSPHO2Q8TCD6 241 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 IPCEF1Q8WWN9 437 aaPredicted RBP3.14□□□□□ -1.91
CD55-207ENST00000465534 NRBF2Q96F24 287 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 CABS1Q96KC9 395 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 CEP295NLQ96MC4 621 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 PSKH2Q96QS6 385 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 TM2D2Q9BX73 214 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 EIF2AQ9BY44 585 aaKnown RBP3.14□□□□□ -1.91
CD55-207ENST00000465534 NSRP1Q9H0G5 558 aaKnown RBP3.14□□□□□ -1.91
CD55-207ENST00000465534 ZNF700Q9H0M5 742 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 SMARCAD1Q9H4L7 1026 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 BICC1Q9H694 974 aaKnown RBP3.14□□□□□ -1.91
CD55-207ENST00000465534 VCPKMTQ9H867 229 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 ATP6V0A4Q9HBG4 840 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 PTPRHQ9HD43 1115 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 TRIM36Q9NQ86 728 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 PAPOLBQ9NRJ5 636 aaKnown RBP3.14□□□□□ -1.91
CD55-207ENST00000465534 FBXO4Q9UKT5 387 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 TBX21Q9UL17 535 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 KIAA1257Q9ULG3 409 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 PNMA8BQ9ULN7 279 aaPredicted RBP3.14□□□□□ -1.91
CD55-207ENST00000465534 TMCO1Q9UM00 188 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 PCDHA7Q9UN72 937 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 PCDHA12Q9UN75 941 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 SIRT4Q9Y6E7 314 aaPredicted RBP3.14□□□□□ -1.91
CD55-207ENST00000465534 CELSR1Q9NYQ6 3014 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 SCN9AQ15858 1988 aa3.14□□□□□ -1.91
CD55-207ENST00000465534 PLXNB2O15031 1838 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 A0A1W2PP64 1363 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 MYO10Q9HD67 2058 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 CENPEQ02224 2701 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 HTR3EA5X5Y0 456 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 A6NCN8 305 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 HNRNPCL2B2RXH8 293 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 B4DLN1 442 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 WDR46O15213 610 aaKnown RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 TEX28O15482 410 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 TLX3O43711 291 aaPredicted RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 HNRNPCL1O60812 293 aaKnown RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 GFPT2O94808 682 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 ACTN1P12814 892 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 KRT13P13646 458 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 CD19P15391 556 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 NR2C2P49116 596 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 GPC3P51654 580 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 KRT83P78385 493 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 GBE1Q04446 702 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 CTBP1Q13363 440 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 KEAP1Q14145 624 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 BRD3Q15059 726 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 GRAMD1BQ3KR37 738 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 CCDC153Q494R4 210 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 PLEKHO1Q53GL0 409 aaPredicted RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 ALFQ53S48 1182 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 NDUFAF5Q5TEU4 345 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 CACHD1Q5VU97 1274 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 NADSYN1Q6IA69 706 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 ERAP2Q6P179 960 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 ANKRD33Q7Z3H0 272 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 RNF10Q8N5U6 811 aaKnown RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 FAM71DQ8N9W8 422 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 PPHLN1Q8NEY8 458 aaKnown RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 DEPTORQ8TB45 409 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 CCDC110Q8TBZ0 833 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 PIGKQ92643 395 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 GTF3C6Q969F1 213 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 EDC3Q96F86 508 aaKnown RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 SNF8Q96H20 258 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 RBM18Q96H35 190 aaKnown RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 MTMR9Q96QG7 549 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 NR1H4Q96RI1 486 aaPredicted RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 CCT7Q99832 543 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 PPCSQ9HAB8 311 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 FZD3Q9NPG1 666 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 MSRB1Q9NZV6 116 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 WNT16Q9UBV4 365 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 NKX1-2Q9UD57 310 aaPredicted RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 CIDEBQ9UHD4 219 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 HERC5Q9UII4 1024 aaKnown RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 LAMP5Q9UJQ1 280 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 ZNF148Q9UQR1 794 aa3.13□□□□□ -1.91
CD55-207ENST00000465534 R3HDM2Q9Y2K5 976 aaKnown RBP3.13□□□□□ -1.91
CD55-207ENST00000465534 ARPC4-TTLL3A0A0A6YYG9 625 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 LOC105371267A0A1B0GV96 52 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 ZNF432O94892 652 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 INMTO95050 263 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 RASAL1O95294 804 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 PAPSS2O95340 614 aaPredicted RBP3.12□□□□□ -1.91
CD55-207ENST00000465534 IL33O95760 270 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 VIMP08670 466 aaKnown RBP3.12□□□□□ -1.91
CD55-207ENST00000465534 PCNAP12004 261 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 CD72P21854 359 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 S100A1P23297 94 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 PSMA4P25789 261 aaKnown RBP3.12□□□□□ -1.91
CD55-207ENST00000465534 HAAOP46952 286 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 RARSP54136 660 aaKnown RBP3.12□□□□□ -1.91
CD55-207ENST00000465534 STK3Q13188 491 aa3.12□□□□□ -1.91
CD55-207ENST00000465534 MSLNQ13421 630 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms