RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 GIMD1P0DJR0 217 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 JUNDP17535 347 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 HK3P52790 923 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 SRP54P61011 504 aaKnown RBP20.21■□□□□ 0.83
SKA3-205ENST00000465471 PPARDQ03181 441 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 PDPK2PQ6A1A2 396 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 ENPP7Q6UWV6 458 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 TRAM1L1Q8N609 369 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 ZNF548Q8NEK5 533 aaPredicted RBP20.21■□□□□ 0.83
SKA3-205ENST00000465471 BTN2A2Q8WVV5 523 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 OR1E3Q8WZA6 343 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 PDXPQ96GD0 296 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 CAMK1GQ96NX5 476 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 ZSCAN5AQ9BUG6 496 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 KLQ9UEF7 1012 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 SLC17A4Q9Y2C5 497 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 ARL5AQ9Y689 179 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 BPTFQ12830 3046 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 CEACAM5P06731 702 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 CEACAM1P13688 526 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 INAVAQ3KP66 663 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 ZDHHC20Q5W0Z9 365 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 DEFB124Q8NES8 71 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 SLCO2A1Q92959 643 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 TSACCQ96A04 125 aaPredicted RBP20.2■□□□□ 0.82
SKA3-205ENST00000465471 SCARF2Q96GP6 870 aaPredicted RBP20.2■□□□□ 0.82
SKA3-205ENST00000465471 HIC2Q96JB3 615 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 CAPZA3Q96KX2 299 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 LRRC61Q9BV99 259 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 BPIFA1Q9NP55 256 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.2■□□□□ 0.82
SKA3-205ENST00000465471 RNF14Q9UBS8 474 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 APOBEC3BQ9UH17 382 aaKnown RBP20.2■□□□□ 0.82
SKA3-205ENST00000465471 CSNK1G3Q9Y6M4 447 aa20.2■□□□□ 0.82
SKA3-205ENST00000465471 E7EVH7 732 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 GAPDHSO14556 408 aaPredicted RBP20.19■□□□□ 0.82
SKA3-205ENST00000465471 LDB2O43679 373 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 RASGRP1O95267 797 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 KCNK5O95279 499 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 LPOP22079 712 aaPredicted RBP20.19■□□□□ 0.82
SKA3-205ENST00000465471 MAGEA6P43360 314 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 BLKP51451 505 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 ZNF140P52738 457 aaPredicted RBP20.19■□□□□ 0.82
SKA3-205ENST00000465471 CDH17Q12864 832 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 KCTD19Q17RG1 926 aaPredicted RBP20.19■□□□□ 0.82
SKA3-205ENST00000465471 ALS2CLQ60I27 953 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 SYT10Q6XYQ8 523 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 OR52K1Q8NGK4 314 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 SLC32A1Q9H598 525 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 IL26Q9NPH9 171 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 MRPL40Q9NQ50 206 aaKnown RBP20.19■□□□□ 0.82
SKA3-205ENST00000465471 CASS4Q9NQ75 786 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 PKP3Q9Y446 797 aa20.19■□□□□ 0.82
SKA3-205ENST00000465471 PLXNB3Q9ULL4 1909 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 PRSS38A1L453 326 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 C2orf81A6NN90 581 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 SCAMP1O15126 338 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 AQP9O43315 295 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 BUD23O43709 281 aaKnown RBP20.18■□□□□ 0.82
SKA3-205ENST00000465471 CRTAMO95727 393 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 KRT14P02533 472 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 FUCA1P04066 466 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 IVLP07476 585 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 APRTP07741 180 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 TPSB2P20231 275 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 PSMA3P25788 255 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 SPAM1P38567 509 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 GRIA1P42261 906 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 PDE1BQ01064 536 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 PTPRCAPQ14761 206 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 TPSAB1Q15661 275 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 GLRX5Q86SX6 157 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 TRIM74Q86UV6 250 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 HID1Q8IV36 788 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 RHBDD1Q8TEB9 315 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 GRK7Q8WTQ7 553 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 SETD7Q8WTS6 366 aaKnown RBP20.18■□□□□ 0.82
SKA3-205ENST00000465471 PTCD2Q8WV60 388 aaKnown RBP20.18■□□□□ 0.82
SKA3-205ENST00000465471 VPS35Q96QK1 796 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 SPATA16Q9BXB7 569 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 SLC13A1Q9BZW2 595 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 SPASTQ9UBP0 616 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 PCYOX1Q9UHG3 505 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 TMPRSS11EQ9UL52 423 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 KCTD3Q9Y597 815 aa20.18■□□□□ 0.82
SKA3-205ENST00000465471 OAS3Q9Y6K5 1087 aaKnown RBP20.18■□□□□ 0.82
SKA3-205ENST00000465471 GIPC1O14908 333 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 INPP4BO15327 924 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 STX7O15400 261 aaKnown RBP20.17■□□□□ 0.82
SKA3-205ENST00000465471 TPH1P17752 444 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 CASQ1P31415 396 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 NOVA1P51513 510 aaKnown RBP20.17■□□□□ 0.82
SKA3-205ENST00000465471 BASP1P80723 227 aaKnown RBP20.17■□□□□ 0.82
SKA3-205ENST00000465471 KCNJ11Q14654 390 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 TRIP13Q15645 432 aaPredicted RBP20.17■□□□□ 0.82
SKA3-205ENST00000465471 PRRT3Q5FWE3 981 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 FSTL5Q8N475 847 aaPredicted RBP20.17■□□□□ 0.82
SKA3-205ENST00000465471 OR4K2Q8NGD2 314 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 OR4C6Q8NH72 309 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 CLPBQ9H078 707 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms