RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	RPGRIP1	Q96KN7	1286 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CD180	Q99467	661 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TUBB6	Q9BUF5	446 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NPL	Q9BXD5	320 aa	Predicted RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	COA1	Q9GZY4	146 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HIPK3	Q9H422	1215 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SLC32A1	Q9H598	525 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TTC12	Q9H892	705 aa	Predicted RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZBTB40	Q9NUA8	1239 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ANKMY1	Q9P2S6	941 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PLEKHB1	Q9UF11	243 aa	Predicted RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TSPYL4	Q9UJ04	414 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZNF112	Q9UJU3	913 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ARHGAP26	Q9UNA1	814 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ICK	Q9UPZ9	632 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	DHDH	Q9UQ10	334 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ROBO3	Q96MS0	1386 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LRBA	P50851	2863 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	DENND4A	Q7Z401	1863 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LAMA1	P25391	3075 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278		A0A0A0MQY5	61 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KIR2DS5	A0A0G2JLQ3	304 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LINC01553	A4QN01	128 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	FOXO6	A8MYZ6	492 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TCP10L2	B9ZVM9	353 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278		E5RJQ4	531 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KIR2DS3	K7RE56	304 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MPHOSPH10	O00566	681 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LRP3	O75074	770 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NEURL1	O76050	574 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TOP3B	O95985	862 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CD4	P01730	458 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SKIV2L2	P42285	1042 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LIMK1	P53667	647 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NR1H2	P55055	460 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NEXN	Q0ZGT2	675 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GALNT2	Q10471	571 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TRIP6	Q15654	476 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SLC18A3	Q16572	532 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SMTNL2	Q2TAL5	461 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	C5orf22	Q49AR2	442 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ENTPD8	Q5MY95	495 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RETSAT	Q6NUM9	610 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LRRC8D	Q7L1W4	858 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GET4	Q7L5D6	327 aa	Predicted RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ANKRD13B	Q86YJ7	626 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SETD9	Q8NE22	299 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ST8SIA4	Q92187	359 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	APOPT1	Q96IL0	206 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SEC62	Q99442	399 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NAP1L4	Q99733	375 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SPRTN	Q9H040	489 aa	Predicted RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PAIP1	Q9H074	479 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LMAN2L	Q9H0V9	348 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PAPOLB	Q9NRJ5	636 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CDH22	Q9UJ99	828 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GMEB2	Q9UKD1	530 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	DDX19B	Q9UMR2	479 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TNN	Q9UQP3	1299 aa		5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TRIP12	Q14669	1992 aa	Predicted RBP	5.24	□□□□□ -1.57
CACNA1C-223	ENST00000465278	OR6C68	A6NDL8	312 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278		F8W810	466 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TULP3	O75386	442 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HOXC6	P09630	235 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CASQ1	P31415	396 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LIFR	P42702	1097 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MAGEA8	P43361	318 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MMP13	P45452	471 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TDO2	P48775	406 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CDH15	P55291	814 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CCL23	P55773	120 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RPS8	P62241	208 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	VAMP2	P63027	116 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RPP30	P78346	268 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MRPS21	P82921	87 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	POU5F1	Q01860	360 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GAD2	Q05329	585 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	POU5F1B	Q06416	359 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HYAL1	Q12794	435 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RABEP1	Q15276	862 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	C1QTNF12	Q5T7M4	302 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	AADACL2	Q6P093	401 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	AAGAB	Q6PD74	315 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KIF6	Q6ZMV9	814 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	DDIAS	Q8IXT1	998 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GHDC	Q8N2G8	530 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NANOGP1	Q8N7R0	232 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HSPH1	Q92598	858 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CNOT9	Q92600	299 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RNF125	Q96EQ8	232 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TIGD1	Q96MW7	591 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MPHOSPH8	Q99549	860 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SLC26A6	Q9BXS9	759 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	API5	Q9BZZ5	524 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CXorf56	Q9H5V9	222 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TDRD3	Q9H7E2	651 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SPAG4	Q9NPE6	437 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	UBN1	Q9NPG3	1134 aa		5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 143 ms